Gene: Sopen04g023860
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g023860
- Transcript Identifier Sopen04g023860.1
- Gene Type Coding gene
- Location Spenn-ch04 : 63223927-63226437 : positive
Gene Family Information
- ID HOM05D006414
- #Genes/#Species 124/89
- Phylogenetic origin
- ID ORTHO05D007780
- #Genes/#Species 127/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g023860.1
Descriptions
- Description EMBRYO DEFECTIVE 2453 (EMB2453) | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 ., Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | Zm00001eb194340 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G39620 |
GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | Zm00001eb194340 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0003729 | IEA | InterPro | mRNA binding | |
GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | Zm00001eb194340 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |