Gene: PGR004G0335

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR004G0335
  • Transcript Identifier PGR004G0335.01
  • Gene Type Coding gene
  • Location NC_045131.1 : 4866783-4868630 : negative

Gene Family Information

  • ID HOM05D006414
  • #Genes/#Species 124/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031395758.1
  • name LOC116207043
  • name XM_031539898.1
  • id gene-LOC116207043
  • uniprot A0A218XC22

Descriptions

  • product pentatricopeptide repeat-containing protein At4g39620, chloroplastic, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing Zm00001eb194340
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G39620
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing Zm00001eb194340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Zm00001eb194340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR044179 Pentatricopeptide repeat-containing protein PPR5-like
Mapman id Description
35.1 not assigned.annotated