Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1892.5 960 100.0
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1495.7 960 77.5
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1433.7 964 74.9
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1431.4 966 74.7
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1429.5 966 73.5
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1426.4 961 72.9
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1423.3 965 72.6
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1421.8 968 74.0
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1421.4 916 75.7
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1421.4 965 73.8
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1418.3 960 73.0
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1415.2 962 74.0
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1414.4 916 74.5
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1413.7 966 71.9
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1410.2 963 73.1
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1407.9 963 72.9
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1407.1 964 72.4
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1407.1 963 71.9
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1407.1 920 75.8
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1406.7 962 73.0
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1406.0 964 72.0
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1406.0 970 73.2
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1404.4 965 72.1
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1404.4 965 72.1
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1403.3 960 72.7
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1402.9 960 72.8
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1401.3 966 73.2
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1399.8 966 71.5
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1399.8 961 72.6
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1399.8 967 72.5
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1399.0 965 71.7
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1397.9 918 73.9
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1397.5 964 72.6
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1397.1 966 71.5
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1396.3 959 72.7
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1396.3 963 71.8
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1394.8 991 70.4
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1394.4 973 71.1
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1394.4 959 72.7
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1393.6 964 70.2
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1391.7 970 71.1
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1391.3 972 72.3
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1389.4 968 71.7
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1389.4 966 71.7
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1388.2 960 71.7
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1386.3 962 70.8
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1385.5 964 71.2
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1384.0 922 72.8
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1383.6 968 72.6
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1383.6 962 71.8
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1383.2 980 70.1
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1382.5 967 70.8
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1381.7 959 71.0
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1380.5 964 71.0
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1379.8 966 70.0
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1377.1 961 69.6
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1375.9 964 70.0
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1375.5 848 78.4
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1375.1 965 71.1
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1375.1 964 69.9
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1374.4 963 72.6
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1374.4 960 70.0
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1374.4 967 69.4
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1372.8 962 70.9
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1372.1 964 69.7
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1372.1 968 71.0
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1371.7 941 71.3
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1370.5 962 71.7
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1370.1 963 70.7
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1369.4 967 71.1
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1368.6 963 70.8
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1367.8 930 71.9
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1367.1 932 71.7
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1364.7 970 71.0
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1357.8 960 70.5
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1355.5 985 68.8
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1355.1 925 73.1
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1351.3 988 68.2
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1339.7 976 68.9
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1339.3 962 68.8
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1336.6 975 69.1
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1335.9 973 69.6
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1335.9 958 70.0
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1334.3 983 68.4
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1333.5 1183 60.4
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1332.8 972 69.3
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1332.8 973 69.1
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1332.4 986 68.2
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1332.4 986 68.2
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1332.0 972 68.8
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1326.6 966 69.4
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1324.7 960 68.2
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1323.5 962 67.8
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1318.5 982 68.0
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1318.1 960 67.8
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1317.8 955 69.1
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1315.1 985 67.7
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1303.5 913 70.6
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1300.4 956 67.6
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1293.1 960 66.5
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1286.2 957 66.4
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1284.6 924 68.4
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1276.9 836 74.6
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1268.4 957 64.3
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1251.5 972 66.2
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1246.5 927 67.2
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1241.5 913 65.8
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1226.1 925 64.2
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1225.3 909 66.4
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1199.9 789 74.0
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1191.4 792 74.4
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1161.0 927 61.2
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1155.2 725 77.2
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1123.2 789 68.2
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1110.9 947 60.6
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 1.9e-309 1065.8 960 56.7
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 3.4e-303 1045.0 958 57.6
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 1.3e-302 1043.1 694 75.6
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 3.3e-298 1028.5 988 52.5
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 7.4e-298 1027.3 936 55.0
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 2.4e-288 995.7 728 68.1
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 1.9e-269 932.9 794 57.4
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.2e-268 930.2 664 68.1
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 1.2e-252 877.1 679 65.4
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 8.6e-246 854.4 594 69.9
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.2e-232 809.3 562 73.1
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 4.6e-215 752.3 520 72.9
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 1.5e-205 720.7 598 64.7
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 1.5e-194 684.1 401 78.6
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.9e-192 677.2 507 66.7
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.6e-175 619.8 386 78.5
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 1.0e-169 601.7 1040 36.8
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 2.6e-165 587.0 414 69.3
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 7.3e-144 515.8 435 58.9
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 1.4e-139 501.5 861 37.7
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 7.3e-136 489.2 409 59.2
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 1.1e-110 405.6 462 51.3
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 1.7e-108 398.3 1052 28.0
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 4.2e-107 393.7 258 69.4
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 4.8e-103 380.2 229 77.7
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 3.1e-102 377.5 287 66.2
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 9.0e-94 349.4 858 30.1
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 6.1e-90 336.7 253 64.4
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 6.1e-90 336.7 253 64.4
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 1.3e-84 318.9 365 41.4
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 7.4e-80 303.1 250 62.4
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 6.7e-73 280.0 288 53.8
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 8.0e-50 203.4 174 51.7
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 1.8e-49 202.2 149 61.1
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 3.7e-47 194.5 149 60.4
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 3.7e-47 194.5 149 60.4
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 7.0e-46 190.3 141 61.0
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 8.9e-41 173.3 141 53.2
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 2.0e-40 172.2 117 69.2
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 3.5e-37 161.4 170 50.0
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 4.5e-37 161.0 99 77.8
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.0e-36 157.5 243 41.6
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 3.3e-35 154.8 109 67.0
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.6e-34 152.5 76 88.2
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.7e-34 151.0 76 86.8
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 6.1e-34 150.6 75 89.3
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.3e-33 148.7 76 86.8
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.5e-32 146.0 83 75.9
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 1.5e-32 146.0 1057 20.5
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.8e-32 144.1 74 86.5
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 2.4e-30 138.7 111 63.1
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 7.0e-30 137.1 131 57.3
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 3.9e-28 131.3 88 75.0
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 1.1e-27 129.8 93 72.0
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 1.1e-25 123.2 140 52.1
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.5e-24 119.4 65 84.6
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 4.9e-23 114.4 118 50.0
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 5.4e-22 110.9 84 64.3
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 6.6e-20 104.0 130 47.7
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.6e-18 99.4 123 42.3
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 1.8e-17 95.9 121 43.0
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 5.1e-12 77.8 82 50.0
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 8.1e-10 70.5 115 35.7
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 1.8e-09 69.3 129 41.1
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 1.5e-08 66.2 46 54.3
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 9.9e-08 63.5 68 47.1
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 4.9e-07 61.2 42 64.3


User provided reference genes

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