Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g201 Utricularia gibba HOM05D001072 ORTHO05D006807 0.0e+00 2100.9 1031 100.0
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 0.0e+00 1186.4 1092 55.6
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 0.0e+00 1156.7 1094 55.2
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 0.0e+00 1113.2 1087 53.4
Dinv09685 Davidia involucrata HOM05D001072 ORTHO05D006807 1.3e-300 1036.6 1109 50.0
Dinv12245 Davidia involucrata HOM05D001072 ORTHO05D006807 1.7e-300 1036.2 1109 50.0
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 1.2e-293 1013.4 1101 49.7
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.7e-293 1012.3 1101 49.6
Lj2A1095G44 Lonicera japonica HOM05D001072 ORTHO05D006807 1.5e-283 979.9 1106 48.1
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 2.5e-283 979.2 1105 47.8
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 1.3e-279 966.8 1108 47.3
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 9.2e-278 960.7 1097 47.0
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 3.3e-275 952.2 1104 46.9
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 3.1e-273 945.7 1108 46.7
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 5.2e-273 944.9 1110 46.8
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 4.4e-272 941.8 1110 46.3
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 1.7e-271 939.9 1127 46.6
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 9.2e-270 934.1 1107 44.6
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 2.7e-269 932.6 1113 46.1
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 6.6e-268 927.9 1109 44.5
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 1.1e-267 927.2 1105 45.8
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 1.2e-266 923.7 1099 44.5
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 3.6e-266 922.2 1106 44.3
PGSC0003DMG402017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 1.4e-265 920.2 1088 44.9
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 5.2e-265 918.3 1153 44.8
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 2.0e-264 916.4 1091 45.4
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 2.0e-264 916.4 1097 44.7
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 3.4e-264 915.6 1091 45.4
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 4.4e-264 915.2 1105 44.5
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 1.3e-263 913.7 1109 45.3
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 1.3e-263 913.7 1125 45.8
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 1.7e-263 913.3 1108 45.6
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 2.2e-263 912.9 1109 45.3
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 2.9e-263 912.5 1105 45.4
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 4.9e-263 911.8 1105 45.5
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.2e-261 907.1 1112 45.1
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 1.2e-261 907.1 1106 45.2
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.1e-259 900.6 1088 45.2
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 2.5e-259 899.4 1098 44.9
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 4.3e-259 898.7 1096 45.2
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 4.3e-259 898.7 1130 44.4
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 3.6e-258 895.6 1103 44.4
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 8.1e-258 894.4 1153 44.1
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 6.8e-257 891.3 1095 44.2
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 4.4e-256 888.6 1102 44.2
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 7.6e-256 887.9 1097 44.0
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 1.3e-255 887.1 1095 44.2
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 3.8e-255 885.6 1099 44.3
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 8.4e-255 884.4 1099 44.1
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 1.9e-254 883.2 1114 45.2
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 4.2e-254 882.1 1095 43.3
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 3.0e-252 875.9 1063 44.5
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 8.7e-252 874.4 1090 45.0
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 9.6e-251 870.9 1112 42.6
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 1.1e-249 867.5 1112 44.4
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 2.4e-249 866.3 1098 43.3
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 5.3e-249 865.1 1103 43.0
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 2.6e-248 862.8 1112 42.7
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 3.4e-248 862.4 1111 42.6
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 1.7e-247 860.1 1113 42.3
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 3.8e-247 859.0 1111 42.5
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 8.4e-247 857.8 1114 44.4
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 1.7e-244 850.1 1077 42.9
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 3.0e-244 849.4 1079 43.7
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 1.4e-238 830.5 1106 42.2
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 3.5e-237 825.9 1101 42.4
QL04p095953 Quercus lobata HOM05D001072 ORTHO05D006807 1.8e-233 813.5 894 46.8
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 6.9e-233 811.6 1104 41.2
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 2.0e-232 810.1 1148 41.0
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 3.4e-232 809.3 1119 42.9
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 1.3e-231 807.4 1098 41.6
Aa31LG11G200 Aethionema arabicum HOM05D001072 ORTHO05D006807 4.9e-231 805.4 1100 41.4
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 4.2e-230 802.4 1123 41.0
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 1.0e-228 797.7 1096 40.6
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 1.8e-228 797.0 1106 40.8
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 1.8e-228 797.0 1101 40.6
A03p12250 Brassica napus HOM05D001072 ORTHO05D006807 3.0e-228 796.2 1094 40.2
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 5.1e-228 795.4 1069 41.7
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 5.1e-228 795.4 1071 41.7
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 8.7e-228 794.7 1100 40.6
ECA236G3191 Erigeron canadensis HOM05D001072 ORTHO05D006807 1.9e-227 793.5 1048 43.0
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 2.5e-227 793.1 1096 40.5
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 1.4e-225 787.3 1107 41.5
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 9.0e-225 784.6 1099 40.6
BraA03t10536Z Brassica rapa HOM05D001072 ORTHO05D006807 1.2e-224 784.3 1096 40.4
C09p50300 Brassica napus HOM05D001072 ORTHO05D006807 1.5e-224 783.9 1091 40.1
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 2.0e-224 783.5 1095 40.2
C03p14380 Brassica napus HOM05D001072 ORTHO05D006807 5.8e-224 781.9 1094 40.3
A10p15850 Brassica napus HOM05D001072 ORTHO05D006807 7.6e-224 781.6 1092 40.0
BcaC04g19869 Brassica carinata HOM05D001072 ORTHO05D006807 1.7e-223 780.4 1091 40.1
BraA10t43640Z Brassica rapa HOM05D001072 ORTHO05D006807 2.2e-223 780.0 1092 40.0
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 2.9e-223 779.6 1098 40.1
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 5.5e-222 775.4 1072 42.2
Eucgr.J01850 Eucalyptus grandis HOM05D001072 ORTHO05D006807 4.3e-219 765.8 1094 42.0
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 1.9e-214 750.4 1114 39.2
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 1.6e-213 747.3 1114 39.5
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 3.7e-210 736.1 1154 39.9
BcaB01g04524 Brassica carinata HOM05D001072 ORTHO05D006807 3.7e-210 736.1 1085 39.2
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 6.3e-202 708.8 1101 36.8
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 1.5e-190 671.0 1130 36.2
Hund08884 Selenicereus undatus HOM05D001072 ORTHO05D006807 1.5e-190 671.0 1050 39.1
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 1.0e-188 664.8 1129 35.8
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 1.7e-186 657.5 1130 35.8
Pp3c11_1040 Physcomitrium patens HOM05D001072 ORTHO05D006807 3.4e-139 500.4 1164 31.6
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 3.0e-135 487.3 1165 31.1
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 8.1e-133 479.2 1012 31.8
Oeu050026.1 Olea europaea HOM05D001072 ORTHO05D006807 2.4e-132 477.6 1036 32.4
SMO367G0609 Selaginella moellendorffii HOM05D001072 ORTHO05D006807 7.1e-121 439.5 953 32.0
PRCOL_00002801 Prasinoderma coloniale HOM05D001072 ORTHO05D006807 6.8e-55 220.3 374 35.3
MCO05G029 Micromonas commoda HOM05D001072 ORTHO05D006807 3.9e-50 204.5 212 45.8
Cre06.g252100 Chlamydomonas reinhardtii HOM05D001072 ORTHO05D006807 5.4e-44 184.1 206 41.7
Solyc09g055260.4 Solanum lycopersicum HOM05D001072 ORTHO05D006807 1.4e-39 169.5 324 31.8
CBR_g30899 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-37 161.8 634 24.6
Cfa024964 Carpinus fangiana HOM05D001072 ORTHO05D006807 9.6e-25 120.2 205 27.8
QL04p095957 Quercus lobata HOM05D001072 ORTHO05D006807 8.9e-23 113.6 157 40.1
Ca_27012_v3 Cicer arietinum L. HOM05D000103 ORTHO05D006807 4.5e-14 84.7 172 28.5
PSO017G5325 Papaver somniferum HOM05D001072 ORTHO05D006807 1.3e-13 83.2 109 38.5
Cpa.g.sc2.314 Carica papaya HOM05D001072 ORTHO05D006807 4.9e-13 81.3 127 33.1
PSO170G1906 Papaver somniferum HOM05D001072 ORTHO05D006807 8.4e-13 80.5 109 37.6
Glyma.14G200551 Glycine max HOM05D001072 ORTHO05D006807 3.3e-09 68.6 71 46.5
CBR_g30901 Chara braunii HOM05D001072 ORTHO05D006807 2.0e-06 59.3 217 26.3


User provided reference genes

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