Gene: Sabra19G0130600

General Information

Structural Information

  • Species Salix brachista
  • Gene Identifier Sabra19G0130600
  • Transcript Identifier Sabra19G0130600.1
  • Gene Type Coding gene
  • Location GWHAAZH00000019 : 18676404-18687681 : positive

Gene Family Information

  • ID HOM05D001072
  • #Genes/#Species 571/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sabra19G0130600.1
  • Accession GWHGAAZH031637
  • Accession GWHTAAZH031637

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990116
IEA
InterProribosome-associated ubiquitin-dependent protein catabolic process
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D001072

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001072
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D001072

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990112
IEA
InterProRQC complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G58410
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D001072

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR039795 E3 ubiquitin-protein ligase listerin
IPR011016 Zinc finger, RING-CH-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR039804 Listerin, zinc finger, RING-type
Mapman id Description
17.3.3.2.1 Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.E3 ubiquitin ligase component LTN1