Gene: AUR62028316

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62028316
Transcript Identifier AUR62028316-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_1426 : 2272081-2287373 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001072
#Genes/#Species 571/100
Phylogenetic origin

ID ORTHO05D006807
#Genes/#Species 138/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62028316.v1.0
pacid 36305465
uniprot A0A803MF98

Descriptions

Short descriptions
Ortholog descriptions

Description At5g58410: E3 ubiquitin-protein ligase listerin

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1990116	IEA	GOA Database	ribosome-associated ubiquitin-dependent protein catabolic process
GO:1990116	IEA	InterPro	ribosome-associated ubiquitin-dependent protein catabolic process
GO:0016567	IEA	GOA Database	protein ubiquitination
GO:0006412	ISO	PLAZA Homology (enrichment)	translation	HOM05D001072

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0061630	IEA	GOA Database	ubiquitin protein ligase activity
GO:0061630	IEA	InterPro	ubiquitin protein ligase activity
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003723	ISO	PLAZA Homology (enrichment)	RNA binding	HOM05D001072
GO:0003735	ISO	PLAZA Homology (enrichment)	structural constituent of ribosome	HOM05D001072

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1990112	IEA	GOA Database	RQC complex
GO:1990112	IEA	InterPro	RQC complex
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G58410
GO:0005840	ISO	PLAZA Homology (enrichment)	ribosome	HOM05D001072

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR039795	E3 ubiquitin-protein ligase listerin
IPR011016	Zinc finger, RING-CH-type
IPR039804	Listerin, zinc finger, RING-type
IPR016024	Armadillo-type fold
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR011989	Armadillo-like helical

Mapman id	Description
17.3.3.2.1	Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.E3 ubiquitin ligase component LTN1