Gene: CSS0014731
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0014731
- Transcript Identifier CSS0014731.1
- Gene Type Coding gene
- Location Contig975 : 13177-39712 : negative
Gene Family Information
- ID HOM05D001072
- #Genes/#Species 571/100
- Phylogenetic origin
- ID ORTHO05D006807
- #Genes/#Species 138/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0014731.1
Descriptions
- Description PREDICTED: E3 ubiquitin-protein ligase listerin [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990116 | IEA | InterPro | ribosome-associated ubiquitin-dependent protein catabolic process | |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001072 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D001072 |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D001072 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990112 | IEA | InterPro | RQC complex | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G58410 |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D001072 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR025659 | Tubby-like, C-terminal |
| IPR039804 | Listerin, zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR011989 | Armadillo-like helical |
| IPR039795 | E3 ubiquitin-protein ligase listerin |
| IPR007612 | LURP-one-related |
| IPR016024 | Armadillo-type fold |
| IPR011016 | Zinc finger, RING-CH-type |
| IPR038595 | LURP-one-related superfamily |
| Mapman id | Description |
|---|---|
| 17.3.3.2.1 | Protein biosynthesis.mRNA quality control.NGD No-Go Decay.Ribosome-associated Quality Control (RQC) complex.E3 ubiquitin ligase component LTN1 |