Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 6.4e-46 187.2 103 100.0
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 6.4e-46 187.2 103 100.0
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 1.7e-30 136.0 77 93.5
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 7.1e-29 130.6 77 89.6
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 1.2e-28 129.8 75 89.3
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.5e-26 122.9 80 86.2
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 3.4e-23 111.7 77 80.5
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 5.8e-23 110.9 77 79.2
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 1.3e-22 109.8 77 79.2
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 2.9e-22 108.6 77 80.5
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 4.2e-21 104.8 74 77.0
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 7.1e-21 104.0 57 94.7
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 9.2e-21 103.6 75 77.3
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 2.1e-20 102.4 69 82.6
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 2.7e-20 102.1 76 75.0
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 6.0e-20 100.9 77 74.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 7.8e-20 100.5 73 74.0
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 2.3e-19 99.0 67 77.6
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 3.0e-19 98.6 74 74.3
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 6.6e-19 97.4 73 71.2
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 6.6e-19 97.4 73 71.2
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 6.6e-19 97.4 76 71.1
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 1.1e-18 96.7 75 70.7
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.5e-18 96.3 73 71.2
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 3.3e-18 95.1 71 70.4
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 3.3e-18 95.1 73 69.9
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 5.6e-18 94.4 72 69.4
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 5.6e-18 94.4 73 72.6
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.3e-17 93.2 69 72.5
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.3e-17 93.2 72 70.8
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.6e-17 92.8 68 73.5
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 2.1e-17 92.4 74 67.6
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 2.8e-17 92.0 76 61.8
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 4.8e-17 91.3 77 66.2
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 6.2e-17 90.9 69 71.0
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 8.1e-17 90.5 74 67.6
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 8.1e-17 90.5 73 67.1
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.1e-16 90.1 68 69.1
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-16 90.1 70 71.4
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-16 90.1 70 71.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.4e-16 89.7 71 63.4
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.4e-16 89.7 73 69.9
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.4e-16 89.7 72 65.3
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 1.4e-16 89.7 72 65.3
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.4e-16 89.7 67 71.6
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.8e-16 89.4 74 67.6
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.8e-16 89.4 69 71.0
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.8e-16 89.4 77 63.6
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 2.4e-16 89.0 77 63.6
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 3.1e-16 88.6 73 68.5
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 3.1e-16 88.6 72 65.3
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 4.0e-16 88.2 73 67.1
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 4.0e-16 88.2 77 62.3
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 4.0e-16 88.2 71 62.0
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 4.0e-16 88.2 71 62.0
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 5.3e-16 87.8 74 60.8
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 5.3e-16 87.8 74 60.8
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 5.3e-16 87.8 79 65.8
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 5.3e-16 87.8 73 65.8
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 6.9e-16 87.4 78 59.0
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 6.9e-16 87.4 74 59.5
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.2e-15 86.7 71 67.6
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.2e-15 86.7 79 64.6
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.5e-15 86.3 73 63.0
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.5e-15 86.3 69 62.3
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.0e-15 85.9 77 62.3
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.0e-15 85.9 76 61.8
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 2.0e-15 85.9 73 63.0
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 2.6e-15 85.5 70 64.3
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 2.6e-15 85.5 70 64.3
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 3.4e-15 85.1 73 58.9
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 3.4e-15 85.1 74 63.5
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 4.4e-15 84.7 72 59.7
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 4.4e-15 84.7 69 68.1
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 5.8e-15 84.3 73 61.6
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 5.8e-15 84.3 70 62.9
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 5.8e-15 84.3 70 62.9
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 5.8e-15 84.3 70 62.9
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 5.8e-15 84.3 70 62.9
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 7.6e-15 84.0 73 61.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 9.9e-15 83.6 75 60.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 9.9e-15 83.6 71 64.8
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 9.9e-15 83.6 73 60.3
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.3e-14 83.2 69 66.7
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.3e-14 83.2 69 66.7
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.7e-14 82.8 68 63.2
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.2e-14 82.4 69 65.2
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 2.9e-14 82.0 73 61.6
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 2.9e-14 82.0 71 62.0
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 2.9e-14 82.0 67 67.2
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.9e-14 82.0 69 65.2
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.9e-14 82.0 73 61.6
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 3.8e-14 81.6 71 62.0
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 3.8e-14 81.6 74 63.5
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 6.4e-14 80.9 67 67.2
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 6.4e-14 80.9 66 60.6
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 8.4e-14 80.5 66 65.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 8.4e-14 80.5 71 62.0
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 8.4e-14 80.5 71 62.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 8.4e-14 80.5 71 62.0
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 8.4e-14 80.5 66 69.7
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 1.1e-13 80.1 93 53.8
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.1e-13 80.1 73 58.9
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.4e-13 79.7 69 59.4
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.4e-13 79.7 74 60.8
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-13 79.7 79 57.0
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 1.9e-13 79.3 79 57.0
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.9e-13 79.3 79 57.0
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.9e-13 79.3 60 65.0
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.9e-13 79.3 74 56.8
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 2.4e-13 79.0 79 57.0
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 3.2e-13 78.6 68 63.2
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 5.4e-13 77.8 69 63.8
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 5.4e-13 77.8 99 50.5
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 9.3e-13 77.0 72 58.3
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.2e-12 76.6 82 54.9
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.7e-12 75.5 66 62.1
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.7e-12 75.5 66 62.1
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.5e-12 75.1 70 58.6
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.6e-12 74.7 76 55.3
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 6.0e-12 74.3 69 59.4
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 7.8e-12 73.9 65 58.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 3.9e-11 71.6 72 55.6
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 1.1e-10 70.1 72 50.0
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-10 69.7 68 55.9
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 5.6e-10 67.8 77 51.9
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 5.6e-10 67.8 59 61.0
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.6e-09 66.2 69 52.2
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.1e-09 65.9 72 48.6
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 2.8e-09 65.5 68 51.5
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 8.1e-09 63.9 51 60.8
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.2e-07 60.1 55 58.2
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.2e-07 60.1 47 72.3
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.5e-07 59.7 66 48.5
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 2.0e-07 59.3 67 47.8
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 9.9e-07 57.0 76 43.4
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 9.9e-07 57.0 77 42.9
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.7e-06 56.2 56 55.4
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 2.2e-06 55.8 74 40.5
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.9e-06 54.7 70 44.3
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 4.9e-06 54.7 66 43.9


User provided reference genes

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