Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M2ZNIJ Arachis hypogaea HOM05D003387 ORTHO05D031551 1.5e-62 242.7 119 100.0
arahy.Tifrunner.gnm1.ann1.9CFF48 Arachis hypogaea HOM05D003387 ORTHO05D005400 1.2e-56 223.0 126 88.9
arahy.Tifrunner.gnm1.ann1.K61U57 Arachis hypogaea HOM05D003387 ORTHO05D005400 1.2e-56 223.0 126 88.9
Glyma.20G168400 Glycine max HOM05D003387 ORTHO05D005400 8.1e-53 210.3 125 83.2
Lj5g0027187 Lotus japonicus HOM05D003387 ORTHO05D005400 1.1e-52 209.9 126 82.5
arahy.Tifrunner.gnm1.ann1.NR2FSQ Arachis hypogaea HOM05D003387 ORTHO05D005400 1.4e-52 209.5 148 75.0
FAN15G3239 Fragaria x ananassa HOM05D003387 ORTHO05D005400 3.1e-52 208.4 125 81.6
Phvul.007G081900 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 4.0e-52 208.0 125 82.4
VMungo0720G1662 Vigna mungo HOM05D003387 ORTHO05D005400 4.0e-52 208.0 125 82.4
CANSAT25G0465 Cannabis sativa HOM05D003387 ORTHO05D005400 5.3e-52 207.6 125 81.6
Glyma.10G223300 Glycine max HOM05D003387 ORTHO05D005400 5.3e-52 207.6 125 81.6
Medtr1g098530 Medicago truncatula HOM05D003387 ORTHO05D005400 1.2e-51 206.5 125 82.4
CSS0039159 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 1.5e-51 206.1 125 80.0
Glyma.16G165000 Glycine max HOM05D003387 ORTHO05D005400 2.0e-51 205.7 121 84.3
CiPaw.16G009800 Carya illinoinensis HOM05D003387 ORTHO05D005400 4.4e-51 204.5 124 81.5
Dinv25885 Davidia involucrata HOM05D003387 ORTHO05D005400 4.4e-51 204.5 125 80.0
Prupe.8G036700 Prunus persica HOM05D003387 ORTHO05D005400 5.8e-51 204.1 125 78.4
MD04G1044700 Malus domestica HOM05D003387 ORTHO05D005400 7.6e-51 203.8 125 79.2
Haze_17786 Corylus avellana HOM05D003387 ORTHO05D005400 9.9e-51 203.4 124 79.8
RcHm_v2.0_Chr6g0274691 Rosa chinensis HOM05D003387 ORTHO05D005400 9.9e-51 203.4 125 78.4
Actinidia29542 Actinidia chinensis HOM05D003387 ORTHO05D005400 1.3e-50 203.0 125 79.2
Cfa018305 Carpinus fangiana HOM05D003387 ORTHO05D005400 1.3e-50 203.0 124 79.8
CiPaw.15G014400 Carya illinoinensis HOM05D003387 ORTHO05D005400 1.3e-50 203.0 124 79.8
FAN27G0365 Fragaria x ananassa HOM05D003387 ORTHO05D005400 1.3e-50 203.0 125 80.0
Sed0017554 Sechium edule HOM05D003387 ORTHO05D005400 1.3e-50 203.0 125 79.2
Glyma.02G080500 Glycine max HOM05D003387 ORTHO05D005400 1.7e-50 202.6 121 82.6
FAN24G3173 Fragaria x ananassa HOM05D003387 ORTHO05D005400 2.2e-50 202.2 126 80.2
Eucgr.F02695 Eucalyptus grandis HOM05D003387 ORTHO05D005400 2.9e-50 201.8 125 77.6
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.9e-50 201.8 121 83.5
Phvul.004G092400 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 3.8e-50 201.4 121 82.6
Psat6g192160 Pisum sativum HOM05D003387 ORTHO05D005400 4.9e-50 201.1 126 81.0
TPR.G17034 Trifolium pratense HOM05D003387 ORTHO05D005400 4.9e-50 201.1 125 79.2
ClCG08G002590 Citrullus lanatus HOM05D003387 ORTHO05D005400 6.4e-50 200.7 125 78.4
MELO3C024993.2 Cucumis melo HOM05D003387 ORTHO05D005400 6.4e-50 200.7 125 78.4
Ca_10675_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 8.4e-50 200.3 126 80.2
FvH4_2g13280 Fragaria vesca HOM05D003387 ORTHO05D005400 1.1e-49 199.9 126 79.4
vmacro01482 Vaccinium macrocarpon HOM05D003387 ORTHO05D005400 1.1e-49 199.9 127 78.7
CsaV3_6G002770 Cucumis sativus L. HOM05D003387 ORTHO05D005400 1.9e-49 199.1 125 78.4
PGR042G1308 Punica granatum HOM05D003387 ORTHO05D005400 1.9e-49 199.1 126 77.8
FAN20G0358 Fragaria x ananassa HOM05D003387 ORTHO05D005400 2.4e-49 198.7 125 77.6
arahy.Tifrunner.gnm1.ann1.LGJ4PH Arachis hypogaea HOM05D003387 ORTHO05D005400 5.4e-49 197.6 115 86.1
arahy.Tifrunner.gnm1.ann1.RF14FM Arachis hypogaea HOM05D003387 ORTHO05D005400 5.4e-49 197.6 115 86.1
Nn1g06041 Nelumbo nucifera HOM05D003387 ORTHO05D005400 7.1e-49 197.2 129 75.2
Nitab4.5_0002445g0040 Nicotiana tabacum HOM05D003387 ORTHO05D005400 1.6e-48 196.1 125 78.4
Psat1g100400 Pisum sativum HOM05D003387 ORTHO05D005400 1.6e-48 196.1 125 78.4
Medtr6g043520 Medicago truncatula HOM05D003387 ORTHO05D005400 2.7e-48 195.3 125 78.4
GSVIVG01034558001 Vitis vinifera HOM05D003387 ORTHO05D005400 3.5e-48 194.9 124 77.4
DCAR_014445 Daucus carota HOM05D003387 ORTHO05D005400 4.6e-48 194.5 125 77.6
Ca_04511_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 6.0e-48 194.1 125 78.4
Atru.chr13.2064 Acer truncatum HOM05D003387 ORTHO05D005400 1.0e-47 193.4 123 77.2
Duzib093G0739 Durio zibethinus HOM05D003387 ORTHO05D005400 1.0e-47 193.4 116 82.8
PSO170G1597 Papaver somniferum HOM05D003387 ORTHO05D005400 1.0e-47 193.4 121 76.9
TWI60G0696 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 1.3e-47 193.0 123 76.4
Gohir.A02G063500 Gossypium hirsutum HOM05D003387 ORTHO05D005400 1.7e-47 192.6 116 82.8
Gorai.005G078200 Gossypium raimondii HOM05D003387 ORTHO05D005400 1.7e-47 192.6 116 82.8
TAR628G0869 Trochodendron aralioides HOM05D003387 ORTHO05D005400 2.3e-47 192.2 120 76.7
GSVIVG01022282001 Vitis vinifera HOM05D003387 ORTHO05D005400 3.0e-47 191.8 125 75.2
MD00G1066300 Malus domestica HOM05D003387 ORTHO05D005400 3.9e-47 191.4 125 75.2
PSO700G0143 Papaver somniferum HOM05D003387 ORTHO05D005400 3.9e-47 191.4 121 76.0
Aqoxy2G00397 Aquilegia oxysepala HOM05D003387 ORTHO05D005400 5.1e-47 191.0 124 75.0
PSO675G7282 Papaver somniferum HOM05D003387 ORTHO05D005400 5.1e-47 191.0 125 75.2
Thecc.08G155500 Theobroma cacao HOM05D003387 ORTHO05D005400 5.1e-47 191.0 116 81.9
CSS0049572 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 6.6e-47 190.7 124 79.0
Cfa002795 Carpinus fangiana HOM05D003387 ORTHO05D005400 6.6e-47 190.7 125 76.0
Cc04_g09690 Coffea canephora HOM05D003387 ORTHO05D005400 6.6e-47 190.7 115 80.9
Gohir.D02G069100 Gossypium hirsutum HOM05D003387 ORTHO05D005400 6.6e-47 190.7 116 81.9
HanXRQChr05g0144181 Helianthus annuus HOM05D003387 ORTHO05D005400 6.6e-47 190.7 115 80.0
Haze_25093 Corylus avellana HOM05D003387 ORTHO05D005400 8.7e-47 190.3 133 72.2
Duzib116G0668 Durio zibethinus HOM05D003387 ORTHO05D005400 8.7e-47 190.3 116 81.0
Sopen10g031260 Solanum pennellii HOM05D003387 ORTHO05D005400 8.7e-47 190.3 125 76.0
CDE06G0083 Ceratophyllum demersum HOM05D003387 ORTHO05D005400 1.1e-46 189.9 117 78.6
Migut.K00003 Erythranthe guttata HOM05D003387 ORTHO05D005400 1.1e-46 189.9 119 79.0
Lsat_1_v5_gn_9_41940 Lactuca sativa HOM05D003387 ORTHO05D005400 1.1e-46 189.9 123 76.4
AL1G51590 Arabidopsis lyrata HOM05D003387 ORTHO05D005400 2.5e-46 188.7 115 79.1
COL.COLO4_03566 Corchorus olitorius HOM05D003387 ORTHO05D005400 2.5e-46 188.7 133 71.4
Manes.18G093400 Manihot esculenta HOM05D003387 ORTHO05D005400 2.5e-46 188.7 115 79.1
Nn5g28791 Nelumbo nucifera HOM05D003387 ORTHO05D005400 2.5e-46 188.7 125 76.8
Peaxi162Scf00076g00821 Petunia axillaris HOM05D003387 ORTHO05D005400 2.5e-46 188.7 125 75.2
Sp1g32390 Schrenkiella parvula HOM05D003387 ORTHO05D005400 2.5e-46 188.7 115 79.1
Hund19618 Selenicereus undatus HOM05D003387 ORTHO05D005400 2.5e-46 188.7 122 73.8
PGSC0003DMG400023660 Solanum tuberosum HOM05D003387 ORTHO05D005400 2.5e-46 188.7 125 75.2
TAR376G0277 Trochodendron aralioides HOM05D003387 ORTHO05D005400 2.5e-46 188.7 131 70.2
TPR.G28008 Trifolium pratense HOM05D003387 ORTHO05D005400 3.3e-46 188.3 126 77.0
MBI16_g07738_MAGBIO Magnolia biondii HOM05D003387 ORTHO05D005400 4.3e-46 188.0 127 74.0
Medtr6g037550 Medicago truncatula HOM05D003387 ORTHO05D005400 4.3e-46 188.0 125 76.0
PSO541G1407 Papaver somniferum HOM05D003387 ORTHO05D005400 4.3e-46 188.0 125 73.6
CiPaw.04G088200 Carya illinoinensis HOM05D003387 ORTHO05D005400 5.6e-46 187.6 125 74.4
CDE08G0132 Ceratophyllum demersum HOM05D003387 ORTHO05D005400 5.6e-46 187.6 117 78.6
ECA232G0053 Erigeron canadensis HOM05D003387 ORTHO05D005400 7.3e-46 187.2 115 79.1
Solyc10g080720.2 Solanum lycopersicum HOM05D003387 ORTHO05D005400 9.6e-46 186.8 125 74.4
A08p06460 Brassica napus HOM05D003387 ORTHO05D005400 1.3e-45 186.4 115 78.3
BraA08t32655Z Brassica rapa HOM05D003387 ORTHO05D005400 1.3e-45 186.4 115 78.3
Eucgr.F04205 Eucalyptus grandis HOM05D003387 ORTHO05D005400 2.1e-45 185.7 126 75.4
Potri.005G194700 Populus trichocarpa HOM05D003387 ORTHO05D005400 2.1e-45 185.7 116 80.2
Sc16g0004050 Simmondsia chinensis HOM05D003387 ORTHO05D005400 2.1e-45 185.7 125 72.0
AT1G43190 Arabidopsis thaliana HOM05D003387 ORTHO05D005400 2.8e-45 185.3 115 78.3
CARHR035330 Cardamine hirsuta HOM05D003387 ORTHO05D005400 2.8e-45 185.3 116 79.3
Ciclev10001148m.g Citrus clementina HOM05D003387 ORTHO05D005400 2.8e-45 185.3 122 74.6
BcaB04g17624 Brassica carinata HOM05D003387 ORTHO05D005400 4.8e-45 184.5 115 77.4
EL10Ac6g15237 Beta vulgaris HOM05D003387 ORTHO05D005400 8.1e-45 183.7 124 73.4
QL02p038708 Quercus lobata HOM05D003387 ORTHO05D005400 8.1e-45 183.7 163 60.1
Thhalv10004261m.g Eutrema salsugineum HOM05D003387 ORTHO05D005400 1.1e-44 183.3 115 75.7
Lalb_Chr02g0141481 Lupinus albus HOM05D003387 ORTHO05D005400 1.1e-44 183.3 119 78.2
THA.LOC104804671 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 1.1e-44 183.3 116 78.4
BcaC07g37311 Brassica carinata HOM05D003387 ORTHO05D005400 1.4e-44 183.0 115 77.4
C08p07450 Brassica napus HOM05D003387 ORTHO05D005400 1.4e-44 183.0 115 77.4
AUR62040585 Chenopodium quinoa HOM05D003387 ORTHO05D005400 1.4e-44 183.0 124 73.4
ATR0115G003 Amborella trichopoda HOM05D003387 ORTHO05D005400 1.8e-44 182.6 138 66.7
ATR1126G056 Amborella trichopoda HOM05D003387 ORTHO05D005400 2.4e-44 182.2 139 66.2
TWI34G1705 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 3.1e-44 181.8 116 76.7
Manes.02G181600 Manihot esculenta HOM05D003387 ORTHO05D005400 4.0e-44 181.4 116 76.7
Potri.002G066000 Populus trichocarpa HOM05D003387 ORTHO05D005400 4.0e-44 181.4 116 79.3
Hund26682 Selenicereus undatus HOM05D003387 ORTHO05D005400 6.9e-44 180.6 125 72.0
HPP92_002768 Vanilla planifolia HOM05D003387 ORTHO05D005400 6.9e-44 180.6 125 70.4
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 9.0e-44 180.3 131 71.8
Sabra05G0148200 Salix brachista HOM05D003387 ORTHO05D005400 1.2e-43 179.9 133 69.9
Sopen12g010100 Solanum pennellii HOM05D003387 ORTHO05D005400 1.2e-43 179.9 125 72.8
Lalb_Chr21g0305541 Lupinus albus HOM05D003387 ORTHO05D005400 1.5e-43 179.5 119 75.6
Lalb_Chr06g0161681 Lupinus albus HOM05D003387 ORTHO05D005400 4.5e-43 177.9 122 75.4
SGA_v2.0_scaffold274G46519 Striga asiatica HOM05D003387 ORTHO05D005400 2.9e-42 175.3 115 74.8
Ah.02g123810 Amaranthus hybridus HOM05D003387 ORTHO05D005400 3.8e-42 174.9 125 68.8
Ah.05g168100 Amaranthus hybridus HOM05D003387 ORTHO05D005400 4.9e-42 174.5 137 63.5
BolC8t47590H Brassica oleracea HOM05D003387 ORTHO05D005400 6.4e-42 174.1 135 66.7
Nitab4.5_0010347g0020 Nicotiana tabacum HOM05D003387 ORTHO05D005400 1.1e-41 173.3 115 73.0
Lj7C377G3 Lonicera japonica HOM05D003387 ORTHO05D005400 2.4e-41 172.2 130 70.8
Carub.0001s3449 Capsella rubella HOM05D003387 ORTHO05D005400 4.2e-41 171.4 115 73.9
Sed0013690 Sechium edule HOM05D003387 ORTHO05D005400 7.1e-41 170.6 115 73.9
AUR62026677 Chenopodium quinoa HOM05D003387 ORTHO05D005400 1.2e-40 169.9 147 61.9
Os05g0437300 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 1.6e-40 169.5 122 68.9
Os01g0867800 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 2.7e-40 168.7 122 69.7
Zm00001eb348540 Zea mays HOM05D003387 ORTHO05D005400 1.0e-39 166.8 122 68.9
PGSC0003DMG400018824 Solanum tuberosum HOM05D003387 ORTHO05D005400 3.0e-39 165.2 155 57.4
SEGI_27673 Sequoiadendron giganteum HOM05D003387 ORTHO05D005400 1.1e-38 163.3 135 65.2
Zm00001eb289150 Zea mays HOM05D003387 ORTHO05D005400 5.6e-38 161.0 123 67.5
Lalb_Chr19g0130191 Lupinus albus HOM05D003387 ORTHO05D005400 9.6e-38 160.2 78 96.2
Aa31LG6G9950 Aethionema arabicum HOM05D003387 ORTHO05D005400 1.3e-37 159.8 150 56.7
Cpa.g.sc49.99 Carica papaya HOM05D003387 ORTHO05D005400 5.3e-36 154.5 78 89.7
arahy.Tifrunner.gnm1.ann1.BQ9MTK Arachis hypogaea HOM05D003387 ORTHO05D005400 1.5e-35 152.9 78 94.9
QL02p037730 Quercus lobata HOM05D003387 ORTHO05D005400 3.4e-35 151.8 78 89.7
EL10Ac1g01585 Beta vulgaris HOM05D003387 ORTHO05D005400 2.9e-34 148.7 78 87.2
AUR62003637 Chenopodium quinoa HOM05D003387 ORTHO05D005400 8.4e-34 147.1 107 66.4
QL06p031240 Quercus lobata HOM05D003387 ORTHO05D005400 4.2e-33 144.8 82 81.7
Medtr6g037510 Medicago truncatula HOM05D003387 ORTHO05D031551 1.2e-32 143.3 78 84.6
Solyc12g019750.3 Solanum lycopersicum HOM05D003387 ORTHO05D005400 3.5e-32 141.7 82 80.5
THA.LOC104809206 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 4.6e-32 141.4 125 64.0
Peaxi162Scf00249g00068 Petunia axillaris HOM05D003387 ORTHO05D031551 1.5e-30 136.3 82 79.3
Pp3c14_14100 Physcomitrium patens HOM05D003387 ORTHO05D005400 2.5e-30 135.6 148 52.0
Pp3c14_17110 Physcomitrium patens HOM05D003387 ORTHO05D005400 9.6e-30 133.7 88 72.7
Mapoly0001s0481 Marchantia polymorpha HOM05D003387 ORTHO05D005400 2.8e-29 132.1 81 75.3
SalBow1G1267 Salvia bowleyana HOM05D003387 ORTHO05D005400 4.8e-29 131.3 105 66.7
CBR_g7995 Chara braunii HOM05D003387 ORTHO05D005400 6.9e-28 127.5 147 47.6
AagrBONN_evm.TU.Sc2ySwM_368.3328 Anthoceros agrestis HOM05D003387 ORTHO05D005400 9.0e-28 127.1 153 49.0
SMO146G0032 Selaginella moellendorffii HOM05D003387 ORTHO05D005400 1.5e-27 126.3 115 56.5
HPP92_001090 Vanilla planifolia HOM05D003387 ORTHO05D005400 1.7e-26 122.9 82 73.2
Lj2g0008478 Lotus japonicus HOM05D003387 ORTHO05D005400 4.3e-22 108.2 75 73.3
Actinidia10635 Actinidia chinensis HOM05D003387 ORTHO05D005400 5.7e-22 107.8 78 69.2
SMO146G0120 Selaginella moellendorffii HOM05D003387 ORTHO05D002201 1.1e-17 93.6 116 44.8
SMO171G0107 Selaginella moellendorffii HOM05D003387 ORTHO05D002201 1.1e-14 83.6 112 47.3
Nitab4.5_0003909g0020 Nicotiana tabacum HOM05D003387 ORTHO05D005400 2.8e-13 79.0 125 43.2
Lalb_Chr19g0130201 Lupinus albus HOM05D003387 ORTHO05D005400 7.7e-11 70.9 48 77.1
AUR62017947 Chenopodium quinoa HOM05D003387 ORTHO05D138110 1.4e-09 66.6 62 54.8
Mapoly0051s0071 Marchantia polymorpha HOM05D003387 ORTHO05D255399 2.5e-09 65.9 62 50.0
Carub.0001s4466 Capsella rubella HOM05D003387 ORTHO05D114561 1.6e-08 63.2 46 67.4
QL02p037738 Quercus lobata HOM05D003387 ORTHO05D005400 4.7e-08 61.6 34 82.4
TPR.G40579 Trifolium pratense HOM05D003387 ORTHO05D411234 3.9e-07 58.5 65 56.9
SMO171G0059 Selaginella moellendorffii HOM05D003387 ORTHO05D376012 1.5e-06 56.6 111 34.2


User provided reference genes

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