Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L3GI5E Arachis hypogaea HOM05D001674 ORTHO05D005257 1.4e-81 306.2 154 100.0
arahy.Tifrunner.gnm1.ann1.GZJK2B Arachis hypogaea HOM05D001674 ORTHO05D005257 1.5e-51 206.5 233 55.4
arahy.Tifrunner.gnm1.ann1.R8ERLJ Arachis hypogaea HOM05D001674 ORTHO05D005257 2.0e-51 206.1 233 54.9
arahy.Tifrunner.gnm1.ann1.H72Z00 Arachis hypogaea HOM05D003946 ORTHO05D005257 2.0e-48 196.1 202 57.9
arahy.Tifrunner.gnm1.ann1.P6110R Arachis hypogaea HOM05D001674 ORTHO05D005257 2.7e-48 195.7 106 92.5
arahy.Tifrunner.gnm1.ann1.QKVB7G Arachis hypogaea HOM05D001674 ORTHO05D005257 4.4e-43 178.3 203 55.2
Ca_21367_v3 Cicer arietinum L. HOM05D001674 ORTHO05D005257 8.9e-36 154.1 103 78.6
Gohir.A06G112800 Gossypium hirsutum HOM05D001674 ORTHO05D005257 1.5e-35 153.3 109 72.5
Lj4g0019577 Lotus japonicus HOM05D001674 ORTHO05D005257 1.5e-35 153.3 105 77.1
Gohir.D06G117500 Gossypium hirsutum HOM05D001674 ORTHO05D005257 4.4e-35 151.8 109 72.5
Gorai.010G135100 Gossypium raimondii HOM05D001674 ORTHO05D005257 4.4e-35 151.8 109 72.5
Cfa015741 Carpinus fangiana HOM05D001674 ORTHO05D005257 8.4e-34 147.5 107 73.8
Dinv24721 Davidia involucrata HOM05D001674 ORTHO05D005257 1.1e-33 147.1 105 73.3
TPR.G12547 Trifolium pratense HOM05D001674 ORTHO05D005257 1.1e-33 147.1 233 44.2
CiPaw.01G127900 Carya illinoinensis HOM05D001674 ORTHO05D005257 1.4e-33 146.7 105 72.4
Atru.chr4.3178 Acer truncatum HOM05D001674 ORTHO05D005257 1.9e-33 146.4 106 74.5
GSVIVG01017700001 Vitis vinifera HOM05D001674 ORTHO05D005257 1.9e-33 146.4 232 43.1
Oeu002203.3 Olea europaea HOM05D001674 ORTHO05D005257 2.4e-33 146.0 103 72.8
Medtr4g124090 Medicago truncatula HOM05D001674 ORTHO05D005257 3.2e-33 145.6 103 74.8
arahy.Tifrunner.gnm1.ann1.QBL01D Arachis hypogaea HOM05D024092 ORTHO05D005257 4.1e-33 145.2 177 52.5
Lalb_Chr13g0299021 Lupinus albus HOM05D001674 ORTHO05D005257 5.4e-33 144.8 234 43.2
Cc03_g00030 Coffea canephora HOM05D001674 ORTHO05D005257 7.1e-33 144.4 103 75.7
DCAR_026930 Daucus carota HOM05D000104 ORTHO05D005257 7.1e-33 144.4 123 63.4
DCAR_026936 Daucus carota HOM05D000104 ORTHO05D005257 7.1e-33 144.4 123 63.4
Sp1g35260 Schrenkiella parvula HOM05D001674 ORTHO05D005257 7.1e-33 144.4 105 71.4
DCAR_026931 Daucus carota HOM05D000104 ORTHO05D005257 9.2e-33 144.1 123 62.6
Prupe.1G103200 Prunus persica HOM05D001674 ORTHO05D005257 9.2e-33 144.1 103 72.8
Ciclev10004488m.g Citrus clementina HOM05D001674 ORTHO05D005257 1.2e-32 143.7 105 70.5
Duzib235G1161 Durio zibethinus HOM05D001674 ORTHO05D005257 1.2e-32 143.7 110 70.0
TWI77G0300 Tripterygium wilfordii HOM05D001674 ORTHO05D005257 1.2e-32 143.7 209 45.9
arahy.Tifrunner.gnm1.ann1.M5C3PT Arachis hypogaea HOM05D001674 ORTHO05D005257 1.6e-32 143.3 176 52.3
arahy.Tifrunner.gnm1.ann1.WH471K Arachis hypogaea HOM05D001674 ORTHO05D005257 1.6e-32 143.3 176 52.3
Lj3C842G5 Lonicera japonica HOM05D001674 ORTHO05D005257 1.6e-32 143.3 105 71.4
THA.LOC104802617 Tarenaya hassleriana HOM05D001674 ORTHO05D005257 1.6e-32 143.3 103 72.8
Phvul.003G123100 Phaseolus vulgaris HOM05D001674 ORTHO05D005257 2.1e-32 142.9 232 42.7
AL1G54910 Arabidopsis lyrata HOM05D001674 ORTHO05D005257 2.7e-32 142.5 105 70.5
Glyma.17G041700 Glycine max HOM05D001674 ORTHO05D005257 2.7e-32 142.5 234 42.3
AT1G48310 Arabidopsis thaliana HOM05D001674 ORTHO05D005257 3.5e-32 142.1 105 70.5
Thhalv10011287m.g Eutrema salsugineum HOM05D001674 ORTHO05D005257 3.5e-32 142.1 105 71.4
CSS0042912 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D005257 4.6e-32 141.7 105 70.5
HanXRQChr05g0148951 Helianthus annuus HOM05D001674 ORTHO05D005257 6.0e-32 141.4 231 40.7
Potri.010G003300 Populus trichocarpa HOM05D001674 ORTHO05D005257 6.0e-32 141.4 105 72.4
CANSAT78G0587 Cannabis sativa HOM05D001674 ORTHO05D005257 7.8e-32 141.0 109 66.1
Nitab4.5_0012375g0010 Nicotiana tabacum HOM05D001674 ORTHO05D005257 7.8e-32 141.0 103 71.8
PSO170G0915 Papaver somniferum HOM05D001674 ORTHO05D005257 1.3e-31 140.2 125 61.6
BcaC05g27587 Brassica carinata HOM05D001674 ORTHO05D005257 1.7e-31 139.8 101 72.3
A05p21130 Brassica napus HOM05D001674 ORTHO05D005257 1.7e-31 139.8 101 72.3
C05p35670 Brassica napus HOM05D001674 ORTHO05D005257 1.7e-31 139.8 101 72.3
Thecc.05G189900 Theobroma cacao HOM05D001674 ORTHO05D005257 1.7e-31 139.8 105 69.5
arahy.Tifrunner.gnm1.ann1.RDG2VZ Arachis hypogaea HOM05D001674 ORTHO05D005257 3.9e-31 138.7 209 46.4
BcaB02g11412 Brassica carinata HOM05D001674 ORTHO05D005257 3.9e-31 138.7 101 72.3
Nitab4.5_0000978g0050 Nicotiana tabacum HOM05D001674 ORTHO05D005257 3.9e-31 138.7 102 71.6
PGSC0003DMG400004680 Solanum tuberosum HOM05D000104 ORTHO05D005257 3.9e-31 138.7 103 71.8
VMungo1215G3338 Vigna mungo HOM05D001674 ORTHO05D005257 3.9e-31 138.7 232 42.2
PSO445G0012 Papaver somniferum HOM05D001674 ORTHO05D005257 5.1e-31 138.3 125 60.8
PGR004G0096 Punica granatum HOM05D001674 ORTHO05D005257 5.1e-31 138.3 103 70.9
CARHR037930 Cardamine hirsuta HOM05D001674 ORTHO05D005257 6.6e-31 137.9 105 68.6
FAN12G1186 Fragaria x ananassa HOM05D001674 ORTHO05D005257 8.6e-31 137.5 187 47.1
Sed0007966 Sechium edule HOM05D001674 ORTHO05D005257 8.6e-31 137.5 106 69.8
SGA_v2.0_scaffold322G48597 Striga asiatica HOM05D001674 ORTHO05D005257 8.6e-31 137.5 101 71.3
QL06p014511 Quercus lobata HOM05D001674 ORTHO05D005257 1.1e-30 137.1 111 66.7
MSTRG.22009 Avicennia marina HOM05D001674 ORTHO05D005257 1.5e-30 136.7 230 41.3
AUR62002539 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.5e-30 136.7 229 42.4
CsaV3_3G015550 Cucumis sativus L. HOM05D001674 ORTHO05D005257 1.5e-30 136.7 104 70.2
Manes.03G212800 Manihot esculenta HOM05D001674 ORTHO05D005257 1.9e-30 136.3 109 67.0
Aa31LG10G5460 Aethionema arabicum HOM05D001674 ORTHO05D005257 4.3e-30 135.2 106 68.9
MELO3C006754.2 Cucumis melo HOM05D001674 ORTHO05D005257 4.3e-30 135.2 104 69.2
Carub.0001s3744 Capsella rubella HOM05D001674 ORTHO05D005257 5.6e-30 134.8 105 65.7
MD13G1156900 Malus domestica HOM05D001674 ORTHO05D005257 5.6e-30 134.8 107 67.3
ClCG05G006880 Citrullus lanatus HOM05D001674 ORTHO05D005257 7.3e-30 134.4 104 69.2
Aqoxy2G02487 Aquilegia oxysepala HOM05D001674 ORTHO05D005257 9.6e-30 134.0 80 86.2
CAN.G484.96 Capsicum annuum HOM05D001674 ORTHO05D005257 9.6e-30 134.0 104 69.2
Os07g0636200 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D005257 9.6e-30 134.0 103 69.9
Rhsim04G0249200 Rhododendron simsii HOM05D001674 ORTHO05D005257 1.6e-29 133.3 80 83.8
RcHm_v2.0_Chr4g0427901 Rosa chinensis HOM05D001674 ORTHO05D005257 2.1e-29 132.9 80 83.8
FAN17G2195 Fragaria x ananassa HOM05D001674 ORTHO05D005257 2.8e-29 132.5 85 77.6
CDE11G0774 Ceratophyllum demersum HOM05D001674 ORTHO05D005257 3.6e-29 132.1 220 42.3
arahy.Tifrunner.gnm1.ann1.L93FEN Arachis hypogaea HOM05D001674 ORTHO05D005257 4.7e-29 131.7 212 43.9
EL10Ac3g06234 Beta vulgaris HOM05D001674 ORTHO05D005257 4.7e-29 131.7 84 78.6
Solyc12g098860.2 Solanum lycopersicum HOM05D001674 ORTHO05D005257 4.7e-29 131.7 103 69.9
Peaxi162Scf00323g00935 Petunia axillaris HOM05D001674 ORTHO05D005257 1.4e-28 130.2 133 56.4
Sopen12g033610 Solanum pennellii HOM05D001674 ORTHO05D005257 1.8e-28 129.8 103 68.9
unitig_8.g3632 Utricularia gibba HOM05D001674 ORTHO05D005257 1.8e-28 129.8 112 62.5
Psat0s1206g0200 Pisum sativum HOM05D001674 ORTHO05D005257 2.4e-28 129.4 205 45.4
ECA246G1105 Erigeron canadensis HOM05D001674 ORTHO05D005257 3.1e-28 129.0 105 64.8
MD16G1134000 Malus domestica HOM05D001674 ORTHO05D005257 4.0e-28 128.6 117 60.7
ATR0796G053 Amborella trichopoda HOM05D001674 ORTHO05D005257 6.8e-28 127.9 125 58.4
MBI19_g30290_MAGBIO Magnolia biondii HOM05D001674 ORTHO05D005257 6.8e-28 127.9 80 81.2
Sc25g0001840 Simmondsia chinensis HOM05D001674 ORTHO05D005257 8.9e-28 127.5 128 57.8
Eucgr.H04132 Eucalyptus grandis HOM05D001674 ORTHO05D005257 1.2e-27 127.1 123 60.2
TAR362G1045 Trochodendron aralioides HOM05D001674 ORTHO05D005257 2.0e-27 126.3 133 57.9
arahy.Tifrunner.gnm1.ann1.5ZM33J Arachis hypogaea HOM05D001674 ORTHO05D005257 2.6e-27 125.9 233 39.9
Migut.N03098 Erythranthe guttata HOM05D001674 ORTHO05D005257 2.6e-27 125.9 83 78.3
arahy.Tifrunner.gnm1.ann1.C6KQRR Arachis hypogaea HOM05D001674 ORTHO05D005257 7.6e-27 124.4 173 46.8
arahy.Tifrunner.gnm1.ann1.3PX28T Arachis hypogaea HOM05D001674 ORTHO05D005257 1.7e-26 123.2 63 92.1
SalBow6G2708 Salvia bowleyana HOM05D001674 ORTHO05D005257 4.9e-26 121.7 117 59.0
arahy.Tifrunner.gnm1.ann1.V6XLN1 Arachis hypogaea HOM05D001674 ORTHO05D005257 1.4e-25 120.2 106 62.3
HPP92_020542 Vanilla planifolia HOM05D000104 ORTHO05D005257 3.2e-25 119.0 101 61.4
arahy.Tifrunner.gnm1.ann1.LSIV7S Arachis hypogaea HOM05D001674 ORTHO05D005257 2.7e-24 115.9 106 60.4
Pp3c16_16990 Physcomitrium patens HOM05D001674 ORTHO05D005257 6.0e-24 114.8 98 63.3
BolC5t32283H Brassica oleracea HOM05D001674 ORTHO05D005257 6.2e-21 104.8 124 53.2
Mapoly0113s0030 Marchantia polymorpha HOM05D000104 ORTHO05D005257 1.1e-20 104.0 101 53.5
Actinidia18515 Actinidia chinensis HOM05D001674 ORTHO05D005257 9.0e-20 100.9 58 86.2
Glyma.13G118200 Glycine max HOM05D001674 ORTHO05D005257 1.5e-19 100.1 186 39.8
CBR_g29672 Chara braunii HOM05D001674 ORTHO05D005257 2.6e-19 99.4 63 69.8
BraA05t21018Z Brassica rapa HOM05D001674 ORTHO05D005257 3.4e-19 99.0 58 86.2
arahy.Tifrunner.gnm1.ann1.XJG2SM Arachis hypogaea HOM05D001674 ORTHO05D005257 2.9e-18 95.9 155 43.9
MD00G1002500 Malus domestica HOM05D000104 ORTHO05D005257 6.4e-18 94.7 65 78.5
Zm00001eb328680 Zea mays HOM05D001674 ORTHO05D005257 3.2e-17 92.4 57 77.2
Cpa.g.sc146.12 Carica papaya HOM05D001674 ORTHO05D005257 9.3e-17 90.9 82 59.8
arahy.Tifrunner.gnm1.ann1.AE44IX Arachis hypogaea HOM05D001674 ORTHO05D005257 5.1e-15 85.1 119 44.5
MCO12G185 Micromonas commoda HOM05D000104 ORTHO05D005257 6.6e-15 84.7 63 61.9
arahy.Tifrunner.gnm1.ann1.J3RYPU Arachis hypogaea HOM05D001674 ORTHO05D005257 8.7e-15 84.3 103 48.5
PRCOL_00002706 Prasinoderma coloniale HOM05D000104 ORTHO05D005257 5.6e-14 81.6 109 46.8
Cre03.g199350 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D005257 8.1e-13 77.8 92 45.7
FvH4_4g21690 Fragaria vesca HOM05D001674 ORTHO05D005257 8.1e-13 77.8 45 86.7
SEGI_25363 Sequoiadendron giganteum HOM05D001674 ORTHO05D005257 5.3e-12 75.1 84 50.0
SMO364G0824 Selaginella moellendorffii HOM05D001674 ORTHO05D005257 1.2e-11 73.9 46 80.4
arahy.Tifrunner.gnm1.ann1.46C2EF Arachis hypogaea HOM05D001674 ORTHO05D005257 2.9e-10 69.3 137 39.4
AUR62023654 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.6e-08 63.5 195 31.8
arahy.Tifrunner.gnm1.ann1.VY9WGI Arachis hypogaea HOM05D001674 ORTHO05D005257 6.0e-08 61.6 106 41.5
Carub.0006s0673 Capsella rubella HOM05D001674 ORTHO05D008374 6.0e-08 61.6 112 34.8
AT5G07810 Arabidopsis thaliana HOM05D001674 ORTHO05D008374 2.3e-07 59.7 111 35.1
arahy.Tifrunner.gnm1.ann1.0H98Z4 Arachis hypogaea HOM05D001674 ORTHO05D005257 2.3e-07 59.7 143 36.4
Ah.07g203550 Amaranthus hybridus HOM05D001674 ORTHO05D005257 3.0e-07 59.3 85 42.4
AL6G18150 Arabidopsis lyrata HOM05D001674 ORTHO05D008374 3.0e-07 59.3 112 34.8
Cre05.g236950 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D005257 3.0e-07 59.3 71 43.7
A03p03470 Brassica napus HOM05D001674 ORTHO05D008374 5.6e-06 55.1 112 33.9
Pp3c1_13300 Physcomitrium patens HOM05D001674 ORTHO05D008374 7.4e-06 54.7 69 42.0
Pp3c1_13308 Physcomitrium patens HOM05D001674 ORTHO05D008374 7.4e-06 54.7 69 42.0
BraA03t09697Z Brassica rapa HOM05D001674 ORTHO05D008374 9.6e-06 54.3 62 46.8
Eucgr.B00565 Eucalyptus grandis HOM05D001674 ORTHO05D008374 9.6e-06 54.3 69 40.6


User provided reference genes

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