Gene: Zm00001eb328680

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb328680
  • Transcript Identifier Zm00001eb328680_T001
  • Gene Type Coding gene
  • Location 7 : 177484198-177503223 : positive

Gene Family Information

  • ID HOM05D001674
  • #Genes/#Species 386/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb328680_T001
  • pid Zm00001eb328680_P001
  • uniprot A0A1D6IKQ7
  • uniprot A0A1D6IKQ6
  • uniprot A0A1D6IKQ9
  • uniprot A0A1D6IKQ8
  • uniprot A0A1D6IKQ3
  • uniprot A0A1D6IKQ2
  • uniprot A0A1D6IKQ5
  • uniprot A0A1D6IKQ4
  • uniprot C4J5Q4
  • uniprot A0A1D6IKQ1
  • uniprot A0A1D6IKQ0
  • uniprot A0A1D6IKR1
  • uniprot A0A3L6E5V7
  • uniprot A0A3L6E4Z2
  • entrez 100501760
  • refseq XM_008653584.1
  • refseq XP_008651806.1
  • V4_identifier Zm00001d022267

Descriptions

  • Description Zm00001e035658
  • Description chromatin remodeling factor18
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031297
IBA
IEA
GOA Databasereplication fork processing
GO:0031297
IEA
InterProreplication fork processing
GO:0006281
IBA
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0048478
IBA
GOA Databasereplication fork protection
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0036310
IEA
GOA Databaseannealing activity
GO:0036310
IEA
InterProannealing activity
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043596
IBA
GOA Databasenuclear replication fork
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR000330 SNF2, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR030101 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
IPR038718 SNF2-like, N-terminal domain superfamily
Mapman id Description
12.4.8.4.1 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SMARCAL1-like group.chromatin remodeling factor (SMARCAL1)