Gene: Pp3c1_13308

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_13308
  • Transcript Identifier Pp3c1_13308V3.1
  • Gene Type Coding gene
  • Location Chr01 : 9722827-9730751 : negative

Gene Family Information

  • ID HOM05D001674
  • #Genes/#Species 386/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_13308V3.1
  • pacid 32969939
  • uniprot A0A2K1L812

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0048478
IBA
GOA Databasereplication fork protection
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0031297
IBA
GOA Databasereplication fork processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004520
IBA
GOA Databaseendodeoxyribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043596
IBA
GOA Databasenuclear replication fork

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR003615 HNH nuclease
IPR000330 SNF2, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR002711 HNH endonuclease
Mapman id Description
12.4.8.4.1 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SMARCAL1-like group.chromatin remodeling factor (SMARCAL1)