Gene: Cc03_g00030
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g00030
- Transcript Identifier Cc03_g00030.1
- Gene Type Coding gene
- Location chr3 : 12151-24700 : positive
Gene Family Information
- ID HOM05D001674
- #Genes/#Species 386/100
- Phylogenetic origin
- ID ORTHO05D005257
- #Genes/#Species 161/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B4F769
- UniProtKB D7T6A3
- UniProtKB Q498E7
- UniProtKB B9S022
- UniProtKB B9HXB5
- UniProtKB Q9NZC9
- id GSCOCG00025574001
Descriptions
- Description Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0031297 | IEA | InterPro | replication fork processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0036310 | IEA | InterPro | annealing activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR030101 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 |
| Mapman id | Description |
|---|---|
| 12.4.8.4.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SMARCAL1-like group.chromatin remodeling factor (SMARCAL1) |