Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HJB560 Arachis hypogaea HOM05D001061 ORTHO05D006729 1.4e-100 369.8 203 100.0
arahy.Tifrunner.gnm1.ann1.4GZ83K Arachis hypogaea HOM05D001061 ORTHO05D006729 8.6e-87 323.9 183 98.4
arahy.Tifrunner.gnm1.ann1.U4UA85 Arachis hypogaea HOM05D001061 ORTHO05D006729 8.4e-58 227.6 136 92.6
arahy.Tifrunner.gnm1.ann1.353VBZ Arachis hypogaea HOM05D001061 ORTHO05D006729 2.4e-57 226.1 133 93.2
arahy.Tifrunner.gnm1.ann1.ZJE509 Arachis hypogaea HOM05D021551 ORTHO05D006729 2.1e-48 196.4 224 58.5
Lj5g0016766 Lotus japonicus HOM05D001061 ORTHO05D006729 6.2e-45 184.9 133 75.2
Glyma.20G157600 Glycine max HOM05D001061 ORTHO05D006729 1.4e-44 183.7 133 75.2
Lalb_Chr06g0161081 Lupinus albus HOM05D001061 ORTHO05D006729 2.4e-44 183.0 133 76.7
Ca_10778_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006729 9.0e-44 181.0 134 75.4
TPR.G14330 Trifolium pratense HOM05D001061 ORTHO05D006729 1.5e-43 180.3 137 73.7
VMungo0720G3063 Vigna mungo HOM05D001061 ORTHO05D006729 2.6e-43 179.5 133 74.4
Phvul.007G069100 Phaseolus vulgaris HOM05D001061 ORTHO05D006729 5.8e-43 178.3 133 73.7
Medtr1g100683 Medicago truncatula HOM05D001061 ORTHO05D006729 2.2e-42 176.4 136 74.3
Psat6g199840 Pisum sativum HOM05D001061 ORTHO05D006729 4.9e-42 175.3 136 71.3
arahy.Tifrunner.gnm1.ann1.H2PW5T Arachis hypogaea HOM05D001514 ORTHO05D002956 3.9e-39 165.6 88 97.7
FvH4_7g29360 Fragaria vesca HOM05D001061 ORTHO05D006729 1.5e-38 163.7 139 66.9
FAN03G0437 Fragaria x ananassa HOM05D001061 ORTHO05D006729 1.9e-38 163.3 139 66.9
QL09p014380 Quercus lobata HOM05D001061 ORTHO05D006729 2.5e-38 162.9 139 65.5
Cfa008311 Carpinus fangiana HOM05D001061 ORTHO05D006729 3.3e-38 162.5 139 66.9
RcHm_v2.0_Chr1g0377121 Rosa chinensis HOM05D001061 ORTHO05D006729 3.3e-38 162.5 173 57.2
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 4.3e-38 162.2 139 66.2
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 4.3e-38 162.2 139 66.2
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 4.3e-38 162.2 139 66.2
Haze_13724 Corylus avellana HOM05D001061 ORTHO05D006729 1.6e-37 160.2 139 65.5
MBI18_g09768_MAGBIO Magnolia biondii HOM05D001061 ORTHO05D006729 2.8e-37 159.5 139 62.6
CSS0048539 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006729 3.7e-37 159.1 137 65.7
FAN10G0894 Fragaria x ananassa HOM05D001061 ORTHO05D006729 4.8e-37 158.7 139 65.5
Potri.015G142900 Populus trichocarpa HOM05D001061 ORTHO05D006729 4.8e-37 158.7 139 64.7
TAR636G1260 Trochodendron aralioides HOM05D001061 ORTHO05D006729 1.1e-36 157.5 139 63.3
Eucgr.L01884 Eucalyptus grandis HOM05D001061 ORTHO05D006729 2.4e-36 156.4 139 64.0
Thecc.03G175500 Theobroma cacao HOM05D001061 ORTHO05D006729 4.0e-36 155.6 142 63.4
Eucgr.K00248 Eucalyptus grandis HOM05D001061 ORTHO05D006729 6.9e-36 154.8 139 63.3
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 6.9e-36 154.8 139 62.6
Dinv28450 Davidia involucrata HOM05D001061 ORTHO05D006729 9.0e-36 154.5 146 60.3
MD07G1267600 Malus domestica HOM05D001061 ORTHO05D006729 9.0e-36 154.5 139 64.0
Hma1.2p1_3335F.1_g335330 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 1.2e-35 154.1 139 61.9
Atru.chr1.472 Acer truncatum HOM05D001061 ORTHO05D006729 1.5e-35 153.7 172 54.7
Nn1g01435 Nelumbo nucifera HOM05D001061 ORTHO05D006729 1.5e-35 153.7 139 61.9
CiPaw.03G105500 Carya illinoinensis HOM05D001061 ORTHO05D006729 2.0e-35 153.3 139 61.9
GSVIVG01010538001 Vitis vinifera HOM05D001061 ORTHO05D006729 3.4e-35 152.5 139 61.9
Hma1.2p1_2482F.1_g322970 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 4.5e-35 152.1 139 61.9
Hma1.2p1_2482F.1_g322980 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 4.5e-35 152.1 139 61.9
Cpa.g.sc107.43 Carica papaya HOM05D001061 ORTHO05D006729 1.0e-34 151.0 139 61.2
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.2e-34 149.8 137 62.8
PGR142G2564 Punica granatum HOM05D001061 ORTHO05D006729 2.2e-34 149.8 139 60.4
Ciclev10004302m.g Citrus clementina HOM05D001061 ORTHO05D006729 4.9e-34 148.7 138 63.0
Duzib205G0347 Durio zibethinus HOM05D001061 ORTHO05D006729 3.2e-33 146.0 142 59.2
Gorai.008G278000 Gossypium raimondii HOM05D001061 ORTHO05D006729 5.5e-33 145.2 142 58.5
Gohir.A12G258300 Gossypium hirsutum HOM05D001061 ORTHO05D006729 7.1e-33 144.8 142 58.5
Prupe.2G293300 Prunus persica HOM05D001061 ORTHO05D006729 7.1e-33 144.8 142 62.0
TWI23G0875 Tripterygium wilfordii HOM05D001061 ORTHO05D006729 7.1e-33 144.8 139 59.7
ClCG05G007980 Citrullus lanatus HOM05D001061 ORTHO05D006729 1.2e-32 144.1 172 52.9
Gohir.D12G259600 Gossypium hirsutum HOM05D001061 ORTHO05D006729 1.6e-32 143.7 142 57.7
Manes.14G026600 Manihot esculenta HOM05D001061 ORTHO05D006729 1.6e-32 143.7 139 59.0
Actinidia34106 Actinidia chinensis HOM05D001061 ORTHO05D006729 2.7e-32 142.9 139 57.6
Lj1A996G55 Lonicera japonica HOM05D001061 ORTHO05D006729 7.9e-32 141.4 138 59.4
Sed0018541 Sechium edule HOM05D001061 ORTHO05D006729 1.0e-31 141.0 143 56.6
ATR0680G072 Amborella trichopoda HOM05D001061 ORTHO05D006729 1.3e-31 140.6 136 58.8
Oeu022585.1 Olea europaea HOM05D001061 ORTHO05D006729 3.9e-31 139.0 137 58.4
HanXRQChr05g0141231 Helianthus annuus HOM05D001061 ORTHO05D006729 5.1e-31 138.7 133 59.4
Sc25g0000470 Simmondsia chinensis HOM05D001061 ORTHO05D006729 5.1e-31 138.7 155 51.6
CsaV3_3G017020 Cucumis sativus L. HOM05D001061 ORTHO05D006729 6.7e-31 138.3 138 58.7
Aqoxy7G00378 Aquilegia oxysepala HOM05D001061 ORTHO05D006729 8.7e-31 137.9 173 48.6
Nitab4.5_0000716g0140 Nicotiana tabacum HOM05D001061 ORTHO05D006729 1.1e-30 137.5 138 56.5
MELO3C006901.2 Cucumis melo HOM05D001061 ORTHO05D006729 1.5e-30 137.1 138 58.0
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-30 137.1 128 63.3
Rhsim03G0180100 Rhododendron simsii HOM05D001061 ORTHO05D006729 1.9e-30 136.7 139 57.6
THA.LOC104811986 Tarenaya hassleriana HOM05D001061 ORTHO05D006729 7.4e-30 134.8 139 54.7
HPP92_020859 Vanilla planifolia HOM05D001061 ORTHO05D006729 9.6e-30 134.4 141 55.3
Lsat_1_v5_gn_8_8260 Lactuca sativa HOM05D001061 ORTHO05D006729 3.7e-29 132.5 138 52.9
DCAR_009363 Daucus carota HOM05D001061 ORTHO05D006729 8.2e-29 131.3 139 55.4
Aa31sc165G10 Aethionema arabicum HOM05D001061 ORTHO05D006729 1.1e-28 131.0 138 52.9
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 1.1e-28 131.0 139 53.2
CANSAT21G0044 Cannabis sativa HOM05D001061 ORTHO05D006729 1.4e-28 130.6 140 59.3
PSO675G8279 Papaver somniferum HOM05D001061 ORTHO05D006729 1.4e-28 130.6 139 52.5
vmacro06688 Vaccinium macrocarpon HOM05D001061 ORTHO05D006729 1.4e-28 130.6 173 47.4
Nitab4.5_0003365g0010 Nicotiana tabacum HOM05D001061 ORTHO05D006729 2.4e-28 129.8 138 55.1
ECA233G1964 Erigeron canadensis HOM05D001061 ORTHO05D009717 3.1e-28 129.4 138 52.9
Sp7g23570 Schrenkiella parvula HOM05D001061 ORTHO05D006729 3.1e-28 129.4 174 46.0
BolC7t45925H Brassica oleracea HOM05D001061 ORTHO05D006729 4.1e-28 129.0 139 52.5
Cc02_g03080 Coffea canephora HOM05D001061 ORTHO05D006729 4.1e-28 129.0 138 56.5
BcaC06g32803 Brassica carinata HOM05D001061 ORTHO05D006729 5.3e-28 128.6 139 51.8
BraA03t14678Z Brassica rapa HOM05D001061 ORTHO05D006729 5.3e-28 128.6 139 52.5
CARHR232960 Cardamine hirsuta HOM05D001061 ORTHO05D006729 5.3e-28 128.6 139 52.5
Peaxi162Scf01452g00006 Petunia axillaris HOM05D001061 ORTHO05D006729 6.9e-28 128.3 172 45.9
CAN.G913.1 Capsicum annuum HOM05D001061 ORTHO05D006729 9.0e-28 127.9 138 52.9
Os04g0682900 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006729 2.0e-27 126.7 138 52.2
AL7G27560 Arabidopsis lyrata HOM05D001061 ORTHO05D006729 2.6e-27 126.3 139 49.6
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 2.6e-27 126.3 139 52.5
Migut.F00349 Erythranthe guttata HOM05D001061 ORTHO05D006729 3.4e-27 125.9 139 51.8
Thhalv10024274m.g Eutrema salsugineum HOM05D001061 ORTHO05D006729 5.9e-27 125.2 174 44.8
Ah.07g207270 Amaranthus hybridus HOM05D001061 ORTHO05D006729 7.6e-27 124.8 133 54.1
Carub.0007s1544 Capsella rubella HOM05D001061 ORTHO05D006729 1.0e-26 124.4 138 48.6
GSVIVG01005294001 Vitis vinifera HOM05D001061 ORTHO05D006729 1.0e-26 124.4 141 52.5
SalBow4G2537 Salvia bowleyana HOM05D001061 ORTHO05D006729 1.3e-26 124.0 139 52.5
AT4G25540 Arabidopsis thaliana HOM05D001061 ORTHO05D006729 1.7e-26 123.6 139 50.4
Hund11753 Selenicereus undatus HOM05D001061 ORTHO05D006729 2.2e-26 123.2 133 52.6
SHI13790 Sapria himalayana HOM05D001061 ORTHO05D006729 2.9e-26 122.9 140 50.0
EL10Ac3g05663 Beta vulgaris HOM05D001061 ORTHO05D006729 8.4e-26 121.3 133 52.6
Solyc03g025890.2 Solanum lycopersicum HOM05D001061 ORTHO05D006729 8.4e-26 121.3 138 51.4
Sopen03g004700 Solanum pennellii HOM05D001061 ORTHO05D006729 1.1e-25 120.9 138 50.7
Zm00001eb434000 Zea mays HOM05D001061 ORTHO05D006729 1.9e-25 120.2 178 44.4
SGA_v2.0_scaffold44G16715 Striga asiatica HOM05D001061 ORTHO05D006729 4.2e-25 119.0 150 48.0
AUR62021201 Chenopodium quinoa HOM05D001061 ORTHO05D006729 5.5e-25 118.6 188 41.5
AUR62015994 Chenopodium quinoa HOM05D001061 ORTHO05D006729 2.1e-24 116.7 188 41.5
SEGI_11976 Sequoiadendron giganteum HOM05D001061 ORTHO05D006729 6.7e-23 111.7 144 45.8
Gohir.D08G191100 Gossypium hirsutum HOM05D001061 ORTHO05D006729 1.5e-22 110.5 129 53.5
CDE11G1074 Ceratophyllum demersum HOM05D001061 ORTHO05D006729 1.9e-22 110.2 143 49.0
unitig_46.g18782 Utricularia gibba HOM05D001061 ORTHO05D006729 4.8e-21 105.5 137 46.7
arahy.Tifrunner.gnm1.ann1.DLLQ71 Arachis hypogaea HOM05D015477 ORTHO05D006729 2.5e-17 93.2 62 80.6
Pp3c2_16220 Physcomitrium patens HOM05D001061 ORTHO05D006729 2.7e-16 89.7 142 37.3
Pp3c2_16228 Physcomitrium patens HOM05D001061 ORTHO05D006729 2.7e-16 89.7 142 37.3
SMO195G0050 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 6.1e-16 88.6 133 42.1
FAN01G1367 Fragaria x ananassa HOM05D001061 ORTHO05D006729 7.9e-16 88.2 63 69.8
SMO116G0252 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.8e-15 87.0 171 36.8
SMO195G0055 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.1e-14 84.3 171 35.7
GSVIVG01036825001 Vitis vinifera HOM05D001061 ORTHO05D006729 2.5e-14 83.2 78 59.0
Mapoly0043s0063 Marchantia polymorpha HOM05D001061 ORTHO05D006729 3.3e-14 82.8 145 32.4
CBR_g38458 Chara braunii HOM05D001061 ORTHO05D006729 5.7e-14 82.0 121 38.0
arahy.Tifrunner.gnm1.ann1.8FB0VI Arachis hypogaea HOM05D015477 ORTHO05D087021 2.4e-12 76.6 61 70.5
SMO195G0022 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 5.3e-12 75.5 171 35.1
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.9e-11 72.0 113 47.8
SMO195G0039 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 5.0e-10 68.9 98 44.9
SMO195G0034 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 2.0e-06 57.0 140 34.3


User provided reference genes

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