Gene: CSS0048539

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0048539
  • Transcript Identifier CSS0048539.1
  • Gene Type Coding gene
  • Location Chr1 : 85524586-85541348 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0048539.1

Descriptions

  • Description PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G25540
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G25540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR036678 MutS, connector domain superfamily
IPR017261 DNA mismatch repair protein MutS/MSH
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR007696 DNA mismatch repair protein MutS, core
IPR045076 DNA mismatch repair MutS family
IPR007860 DNA mismatch repair protein MutS, connector domain
Mapman id Description
14.7.1.2 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH3