Gene: TPR.G14330
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G14330
- Transcript Identifier TPR.T14809
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG1 : 13106177-13109476 : negative
Gene Family Information
- ID HOM05D001061
- #Genes/#Species 575/100
- Phylogenetic origin
- ID ORTHO05D006729
- #Genes/#Species 139/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA14809.v2
- id Tp57577_TGAC_v2_gene14330.v2
- pacid 35980564
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G25540 |
| GO:0003684 | ISO | PLAZA Integrative Orthology | damaged DNA binding | AT4G25540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000432 | DNA mismatch repair protein MutS, C-terminal |
| IPR045076 | DNA mismatch repair MutS family |
| IPR007696 | DNA mismatch repair protein MutS, core |
| IPR011184 | DNA mismatch repair Msh2-type |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036187 | DNA mismatch repair protein MutS, core domain superfamily |
| Mapman id | Description |
|---|---|
| 14.7.1.2 | DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH3 |