Gene: Cc02_g03080
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g03080
- Transcript Identifier Cc02_g03080.1
- Gene Type Coding gene
- Location chr2 : 2471993-2479227 : positive
Gene Family Information
- ID HOM05D001061
- #Genes/#Species 575/100
- Phylogenetic origin
- ID ORTHO05D006729
- #Genes/#Species 139/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB P20585
- UniProtKB O65607
- UniProtKB P13705
- UniProtKB F6HP08
- UniProtKB D7MFZ8
- UniProtKB B9R9C8
- id GSCOCG00020180001
Descriptions
- Description DNA mismatch repair protein Msh3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G25540 |
| GO:0003684 | ISO | PLAZA Integrative Orthology | damaged DNA binding | AT4G25540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016151 | DNA mismatch repair protein MutS, N-terminal |
| IPR017261 | DNA mismatch repair protein MutS/MSH |
| IPR000432 | DNA mismatch repair protein MutS, C-terminal |
| IPR007860 | DNA mismatch repair protein MutS, connector domain |
| IPR007695 | DNA mismatch repair protein MutS-like, N-terminal |
| IPR007696 | DNA mismatch repair protein MutS, core |
| IPR036187 | DNA mismatch repair protein MutS, core domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR045076 | DNA mismatch repair MutS family |
| IPR036678 | MutS, connector domain superfamily |
| Mapman id | Description |
|---|---|
| 14.7.1.2 | DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH3 |