Gene: Lsat_1_v5_gn_8_8260

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_8260
  • Transcript Identifier Lsat_1_v5_gn_8_8260.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 10046352-10050526 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_8260.v5
  • pacid 38951350

Descriptions

  • Description K08736 - DNA mismatch repair protein MSH3 (MSH3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G25540
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G25540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR007696 DNA mismatch repair protein MutS, core
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR017261 DNA mismatch repair protein MutS/MSH
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR045076 DNA mismatch repair MutS family
IPR036678 MutS, connector domain superfamily
Mapman id Description
14.7.1.2 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH3