Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 0.0e+00 1239.2 629 100.0
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.3e-250 869.8 630 67.5
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 5.5e-249 864.4 630 66.8
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 7.1e-249 864.0 630 66.0
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.3e-247 859.8 631 66.9
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 3.9e-247 858.2 631 65.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.1e-246 856.7 630 66.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 4.3e-246 854.7 630 64.8
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 1.6e-245 852.8 630 67.5
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 8.2e-245 850.5 630 66.0
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 2.0e-243 845.9 607 66.9
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 4.5e-243 844.7 630 65.7
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 5.0e-242 841.3 631 65.6
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.1e-241 840.1 631 65.6
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 4.2e-241 838.2 630 65.2
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 3.6e-240 835.1 631 64.0
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 3.0e-239 832.0 629 65.2
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 6.7e-239 830.9 610 65.1
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.1e-238 830.1 631 64.2
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.5e-238 829.7 638 64.6
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 4.3e-238 828.2 631 64.3
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.3e-237 826.6 664 61.9
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 3.7e-237 825.1 631 64.8
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 3.7e-237 825.1 630 64.1
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.4e-236 823.2 631 63.2
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 1.4e-236 823.2 634 64.4
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.4e-236 823.2 631 63.9
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 9.0e-236 820.5 631 64.5
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.0e-235 819.3 631 64.3
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 2.6e-235 818.9 631 62.8
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 3.4e-235 818.5 630 64.0
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 2.9e-234 815.5 632 62.8
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 4.2e-233 811.6 630 63.5
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 5.5e-233 811.2 633 63.3
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 4.6e-232 808.1 630 63.7
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.0e-231 805.4 631 63.1
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 4.4e-230 801.6 631 63.1
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.7e-230 801.2 631 62.6
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 7.4e-230 800.8 631 62.4
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 3.7e-229 798.5 722 56.8
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.1e-228 797.0 625 63.2
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.8e-228 796.2 632 63.4
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 3.1e-228 795.4 631 63.2
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.0e-226 790.4 638 62.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.3e-226 790.0 631 61.3
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.2e-224 783.5 633 61.5
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.0e-223 778.9 631 61.0
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 3.9e-223 778.5 631 61.3
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 3.3e-222 775.4 631 61.3
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 3.3e-222 775.4 631 61.5
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 9.7e-222 773.9 633 62.1
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.8e-220 769.6 630 61.4
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 4.1e-220 768.5 632 60.8
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.1e-220 768.5 631 60.9
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 7.0e-220 767.7 630 60.5
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.0e-219 766.1 632 61.4
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.6e-219 765.8 630 60.8
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.7e-218 763.1 631 60.4
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.7e-218 763.1 638 60.3
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 4.2e-217 758.4 632 60.6
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 4.2e-217 758.4 632 60.1
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 4.4e-214 748.4 592 62.8
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 3.8e-210 735.3 635 59.2
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-208 730.3 642 57.6
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-208 730.3 630 58.4
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 1.4e-207 726.9 630 58.4
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-207 726.1 641 57.7
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.7e-205 719.9 646 57.0
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 2.0e-203 713.0 647 57.3
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 5.9e-203 711.4 638 58.8
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 2.5e-201 706.1 589 59.8
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 1.6e-200 703.4 639 56.3
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 9.8e-198 694.1 494 67.8
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 1.6e-195 686.8 631 57.2
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.3e-194 683.7 549 61.6
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.2e-190 670.6 743 50.3
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.2e-189 666.4 630 55.7
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.1e-177 627.5 654 52.1
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.5e-177 627.1 592 54.9
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.0e-174 616.7 646 51.4
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 2.2e-173 613.2 629 52.5
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.7e-170 603.6 623 49.4
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.6e-162 575.1 440 63.0
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.6e-158 563.1 565 48.8
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.7e-157 560.5 566 49.1
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.0e-154 551.2 402 65.7
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 3.5e-147 526.2 636 44.5
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.3e-141 507.7 441 57.8
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.5e-137 493.4 625 43.7
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 2.8e-136 490.0 625 43.8
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.3e-120 438.0 546 46.3
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 2.2e-117 427.2 630 41.4
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 9.4e-116 421.8 310 65.8
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 7.2e-108 395.6 293 65.2
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 4.7e-107 392.9 360 56.1
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 6.3e-104 382.5 271 68.6
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 5.9e-102 375.9 296 63.5
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.0e-101 375.2 281 62.6
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 6.8e-82 309.3 243 62.6
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.3e-80 305.1 244 60.2
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.2e-78 298.5 234 62.8
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 7.8e-78 295.8 244 61.1
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 2.3e-74 284.3 228 64.0
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.3e-69 268.5 158 82.9
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.8e-66 258.1 247 53.4
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 3.0e-53 214.2 699 27.3
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 5.2e-50 203.4 180 59.4
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 5.4e-47 193.4 179 56.4
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-45 188.0 169 58.0
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.1e-42 179.1 189 50.8
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 9.0e-42 176.0 137 66.4
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 4.9e-40 170.2 601 27.6
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 3.9e-37 160.6 136 61.8
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 9.6e-36 156.0 722 24.2
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 2.4e-31 141.4 119 58.0
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.0e-29 136.0 105 59.0
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 4.9e-24 117.1 67 88.1
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.7e-22 111.3 92 54.3
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.6e-19 102.1 70 65.7
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 1.4e-15 89.0 86 48.8
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 4.2e-15 87.4 53 73.6
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 9.3e-15 86.3 64 64.1
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.1e-14 85.1 65 60.0
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.9e-13 80.9 64 64.1
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 3.3e-12 77.8 135 38.5
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.4e-10 72.4 80 55.0
HPP92_015929 Vanilla planifolia HOM05D006139 ORTHO05D007681 5.0e-08 63.9 50 66.0
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 8.5e-08 63.2 77 45.5


User provided reference genes

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