Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1854.7 957 100.0
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1718.7 909 93.9
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1696.8 958 91.0
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1691.8 965 90.5
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1691.4 966 90.7
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1677.1 958 89.9
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1672.9 957 88.4
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1669.8 957 89.2
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1664.4 957 88.9
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1648.3 961 87.3
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1647.1 958 88.2
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1645.6 965 88.4
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1643.2 966 88.7
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1636.7 962 85.7
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1630.9 967 86.6
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1630.9 915 87.8
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1625.5 957 86.4
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1623.6 984 85.2
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1615.5 961 85.8
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1613.6 960 84.7
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1612.8 959 86.3
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1612.4 960 84.8
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1610.5 963 85.9
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1610.5 957 86.1
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1610.5 959 85.2
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1610.5 962 86.1
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1609.3 960 85.4
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1608.6 961 85.5
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1607.0 957 84.7
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1606.7 963 84.9
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1606.3 957 84.6
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1605.9 959 85.6
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1605.5 963 86.7
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1600.9 963 83.8
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1600.5 960 84.1
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1597.4 912 86.5
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1597.0 961 84.2
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1596.6 960 84.6
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1596.3 960 82.1
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1595.5 958 85.6
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1595.1 962 85.0
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1592.8 959 84.3
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1592.4 959 84.2
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1589.7 958 83.7
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1587.8 963 83.3
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1587.4 912 85.3
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1586.2 963 82.2
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1583.2 960 83.3
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1580.8 959 82.2
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1580.5 962 83.1
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1580.1 962 83.1
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1577.4 977 82.0
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1577.4 958 82.0
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1575.5 967 82.3
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1573.1 961 82.8
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1573.1 964 82.9
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1567.7 965 83.8
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1567.4 965 83.5
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1567.0 965 82.0
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1566.6 963 81.4
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1566.2 957 83.1
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1565.8 964 83.5
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1565.1 963 81.3
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1564.3 960 81.4
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1555.4 960 81.8
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1555.0 962 82.4
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1553.9 960 81.8
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1543.5 958 81.5
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1543.5 918 83.6
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1540.8 952 82.9
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1536.9 915 81.6
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1536.9 989 79.3
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1528.5 962 81.2
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1523.5 984 78.5
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1520.8 919 80.0
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1520.4 930 81.4
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1512.7 965 80.4
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1512.3 1185 69.1
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1508.0 971 79.7
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1503.8 953 80.9
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1501.9 966 79.4
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1501.5 962 80.8
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1499.6 982 78.9
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1498.4 962 79.8
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1497.6 983 79.0
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1497.6 983 79.0
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1496.9 920 81.1
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1495.7 969 79.5
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1494.9 968 79.6
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1487.6 965 78.7
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1486.9 974 78.5
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1484.2 958 79.4
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1483.0 977 79.0
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1481.1 978 78.5
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1478.4 962 78.2
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1473.0 959 77.8
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1470.7 911 81.4
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1464.5 831 85.8
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1449.5 957 75.1
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1441.4 842 82.7
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1431.4 965 77.2
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1431.4 951 73.4
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1429.5 919 76.9
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1429.1 965 73.8
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1421.8 955 74.6
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1395.6 922 75.2
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1381.3 932 74.7
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1366.3 911 72.8
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1354.0 962 71.2
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1348.6 786 85.6
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1329.3 786 83.1
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1281.5 726 86.0
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1278.1 921 68.2
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1226.1 787 74.6
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1213.0 940 65.2
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1202.6 687 86.3
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1166.4 995 61.5
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 0.0e+00 1159.8 955 64.7
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1148.3 983 59.0
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1133.2 965 60.6
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 0.0e+00 1112.4 722 79.6
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.6e-300 1036.2 663 78.7
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 9.1e-288 993.8 786 61.7
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 9.4e-285 983.8 673 77.1
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 3.6e-276 955.3 593 80.8
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 2.0e-263 912.9 561 81.1
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 1.8e-251 873.2 521 83.5
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 5.2e-243 845.1 599 74.3
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.7e-225 786.9 499 78.6
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 2.2e-217 760.0 441 89.1
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.3e-193 681.0 386 86.0
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.8e-188 662.5 408 85.0
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 5.7e-181 639.0 1031 38.5
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 2.7e-154 550.4 415 65.8
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 1.2e-149 535.0 413 63.9
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 1.2e-141 508.4 820 38.0
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 9.2e-131 472.2 480 56.7
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 1.9e-120 438.0 253 83.4
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 1.6e-119 434.9 223 91.9
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 2.9e-108 397.5 881 32.6
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 4.9e-108 396.7 1052 27.8
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 2.4e-107 394.4 279 69.2
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 4.9e-100 370.2 249 73.9
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 1.4e-94 352.1 253 67.2
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 1.4e-94 352.1 253 67.2
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 4.9e-92 343.6 365 46.8
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 2.0e-85 321.6 286 61.5
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 1.8e-62 245.4 148 78.4
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 3.5e-53 214.5 174 54.6
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 1.0e-49 203.0 149 63.1
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 1.0e-49 203.0 149 63.1
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.7e-48 197.2 240 52.1
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.3e-47 196.1 118 78.8
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 4.8e-47 194.1 139 64.0
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 2.2e-44 185.3 168 57.1
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 1.9e-43 182.2 103 84.5
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 1.5e-40 172.6 141 53.9
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 2.0e-40 172.2 99 81.8
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 8.3e-39 166.8 131 66.4
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.3e-36 159.5 111 71.2
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 8.6e-36 156.8 76 92.1
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.5e-35 155.2 76 90.8
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 6.1e-34 150.6 75 90.7
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.0e-33 148.3 76 86.8
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 1.5e-32 146.0 88 79.5
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.4e-32 144.4 78 83.3
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.4e-32 144.4 74 87.8
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 1.7e-31 142.5 98 74.5
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 1.7e-28 132.5 306 35.0
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 2.3e-28 132.1 147 51.7
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 5.0e-28 131.0 112 58.0
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 3.3e-27 128.3 121 55.4
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 9.5e-27 126.7 123 53.7
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.2e-26 126.3 65 90.8
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 2.6e-24 118.6 130 53.1
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 2.3e-17 95.5 286 25.2
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 1.7e-15 89.4 82 56.1
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 3.5e-13 81.6 56 67.9
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 8.1e-10 70.5 46 63.0
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 1.8e-09 69.3 133 42.1
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 2.3e-09 68.9 85 45.9
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 3.4e-08 65.1 42 69.0
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 2.9e-07 62.0 48 58.3


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