Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 2.6e-257 891.7 513 100.0
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.2e-254 882.9 513 98.6
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 7.8e-254 880.2 513 97.5
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 5.1e-245 850.9 513 95.9
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 2.8e-243 845.1 513 95.5
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 1.5e-241 839.3 510 92.2
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.5e-241 839.3 510 92.5
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 1.5e-241 839.3 509 93.1
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 1.0e-237 826.6 510 91.8
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 1.9e-236 822.4 507 90.1
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 4.0e-234 814.7 510 91.8
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.7e-232 809.3 510 89.2
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 2.9e-232 808.5 511 90.0
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 6.5e-232 807.4 510 90.4
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 6.5e-232 807.4 510 91.4
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 6.5e-232 807.4 511 88.1
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.4e-231 806.2 510 87.8
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 4.2e-231 804.7 509 89.2
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 1.2e-230 803.1 510 88.8
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.2e-230 803.1 510 88.8
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.7e-230 802.0 538 83.8
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 3.5e-230 801.6 510 90.4
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 7.9e-230 800.4 511 89.4
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 2.3e-229 798.9 511 87.1
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 2.3e-229 798.9 511 89.2
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 6.7e-229 797.3 525 81.9
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 8.7e-229 797.0 510 89.2
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 6.3e-227 790.8 510 89.0
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.4e-226 789.6 538 84.4
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 1.8e-226 789.3 510 87.5
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 4.1e-226 788.1 510 88.8
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 6.9e-226 787.3 510 88.6
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 9.0e-226 786.9 509 89.4
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 9.0e-226 786.9 510 87.8
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.5e-225 786.2 510 88.2
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 2.6e-225 785.4 511 88.6
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 2.6e-225 785.4 510 87.8
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 2.6e-225 785.4 510 88.4
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 4.5e-225 784.6 511 88.3
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 4.5e-225 784.6 510 87.8
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 4.5e-225 784.6 510 89.0
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 7.7e-225 783.9 510 88.0
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 1.0e-224 783.5 510 88.2
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 2.9e-224 781.9 510 88.0
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 3.8e-224 781.6 511 88.5
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 6.5e-224 780.8 511 87.5
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 8.5e-224 780.4 511 85.3
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 4.2e-223 778.1 510 87.5
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 4.2e-223 778.1 510 86.1
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 7.2e-223 777.3 511 82.6
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 7.2e-223 777.3 510 87.1
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 1.2e-222 776.5 510 87.1
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 1.6e-222 776.2 511 86.7
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.6e-222 776.2 510 86.3
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 4.6e-222 774.6 510 86.9
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.0e-221 773.5 510 86.7
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 1.8e-221 772.7 502 87.5
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.9e-221 771.5 510 86.7
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 5.1e-221 771.2 510 86.9
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 2.0e-220 769.2 510 85.5
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 2.5e-220 768.8 510 85.7
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 7.4e-220 767.3 513 85.2
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 7.4e-220 767.3 513 85.2
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 7.4e-220 767.3 510 87.1
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 1.3e-219 766.5 511 85.3
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.3e-219 766.5 511 85.3
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.7e-219 766.1 510 85.5
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 2.8e-219 765.4 510 86.9
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 3.7e-219 765.0 502 87.1
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 4.8e-219 764.6 511 83.6
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 4.8e-219 764.6 509 84.7
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 6.3e-219 764.2 511 87.7
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 8.2e-219 763.8 509 84.9
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 8.2e-219 763.8 509 84.7
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.1e-218 761.9 502 87.6
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 9.1e-218 760.4 510 85.9
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 1.5e-217 759.6 509 85.5
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 1.5e-217 759.6 510 86.7
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.0e-216 756.9 510 80.0
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 2.9e-216 755.4 515 83.9
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 8.5e-216 753.8 510 83.9
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 7.2e-215 750.7 502 84.3
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.7e-214 748.8 502 85.1
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 4.7e-214 748.0 510 84.9
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 6.1e-214 747.7 510 84.7
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.0e-213 746.9 498 82.7
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 6.7e-213 744.2 510 85.5
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.5e-212 743.0 509 84.9
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.4e-210 736.5 510 78.6
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 1.8e-210 736.1 518 82.4
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 3.5e-209 731.9 505 83.2
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.1e-206 722.6 485 86.6
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 8.0e-206 720.7 548 73.9
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 1.0e-205 720.3 511 81.0
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.8e-205 719.5 510 79.8
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 4.4e-204 714.9 508 83.5
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 5.0e-200 701.4 531 77.0
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.0e-197 693.7 482 85.3
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.0e-197 693.7 510 77.1
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 4.0e-197 691.8 510 74.7
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 1.3e-195 686.8 553 72.0
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 1.7e-195 686.4 466 87.3
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 6.3e-195 684.5 521 78.7
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 4.1e-194 681.8 462 88.3
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 2.2e-192 676.0 510 75.9
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 1.6e-190 669.8 511 69.1
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.9e-184 649.0 430 87.9
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 9.5e-183 644.0 510 78.0
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 6.8e-181 637.9 428 88.1
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 1.8e-178 629.8 433 83.4
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 8.1e-166 587.8 511 66.7
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 7.1e-154 548.1 414 80.0
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 1.9e-151 540.0 514 62.3
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 3.5e-137 492.7 267 89.1
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 6.6e-136 488.4 320 90.9
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 4.0e-133 479.2 252 94.0
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 1.0e-123 448.0 315 80.6
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 9.7e-111 404.8 383 58.7
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 2.2e-107 393.7 208 94.7
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 5.0e-107 392.5 208 94.2
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 8.5e-91 338.6 365 68.8
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 4.4e-79 299.7 204 83.8
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.0e-75 288.5 255 71.8
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 3.8e-75 286.6 518 45.8
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 1.8e-64 251.1 132 96.2
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 2.2e-62 244.2 526 35.2
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 1.7e-51 208.0 254 43.3
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 4.3e-42 176.8 99 80.8
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 2.8e-41 174.1 106 77.4
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 6.0e-36 156.4 295 34.9
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 1.7e-35 154.8 80 87.5
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 3.0e-35 154.1 242 44.6
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 1.2e-33 148.7 78 92.3
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 3.6e-33 147.1 107 72.9
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 8.1e-33 146.0 137 62.0
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.7e-28 131.0 70 87.1
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 1.5e-26 125.2 100 65.0
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 1.5e-26 125.2 100 65.0
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.9e-26 124.8 69 84.1
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 1.6e-25 121.7 64 84.4
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 1.6e-25 121.7 64 84.4
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 4.9e-22 110.2 57 87.7
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 6.0e-20 103.2 50 90.0
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 2.5e-18 97.8 56 73.2
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 1.4e-16 92.0 44 90.9
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 5.3e-16 90.1 47 95.7
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 2.6e-15 87.8 44 86.4
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 9.9e-15 85.9 134 66.4
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.3e-14 85.5 126 41.3
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 2.3e-11 74.7 103 43.7
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 3.3e-10 70.9 36 80.6
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 3.1e-08 64.3 60 60.0
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 2.0e-07 61.6 35 74.3
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 2.2e-06 58.2 74 52.7
PRCOL_00005022 Prasinoderma coloniale HOM05D001610 ORTHO05D002685 2.9e-06 57.8 308 31.2


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