Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 4.3e-150 534.6 270 100.0
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 5.3e-116 421.4 225 93.8
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.2e-112 410.2 225 92.0
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 5.6e-110 401.4 225 89.8
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.8e-108 396.4 225 88.0
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 9.0e-108 394.0 225 86.2
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 3.8e-106 388.7 225 86.2
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 7.1e-105 384.4 225 85.3
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.1e-102 377.1 219 85.8
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 6.2e-101 371.3 228 83.3
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.8e-100 369.8 227 83.3
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.5e-94 350.1 227 74.0
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 8.2e-93 344.4 226 76.5
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 5.8e-91 338.2 227 74.4
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.9e-90 335.9 227 74.0
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.1e-89 334.0 228 74.6
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.4e-89 333.6 228 71.9
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 2.5e-89 332.8 228 71.5
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 4.2e-89 332.0 227 72.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 5.5e-89 331.6 226 73.9
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 7.1e-89 331.3 228 71.5
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 7.9e-88 327.8 225 71.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.8e-87 326.6 227 70.9
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 2.3e-87 326.2 234 69.2
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 3.0e-87 325.9 228 71.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 8.7e-87 324.3 225 69.8
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.1e-86 323.9 225 70.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.1e-86 323.9 259 65.6
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.5e-86 322.8 227 70.5
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.3e-85 320.5 227 70.0
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.6e-85 320.1 225 69.8
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.6e-85 320.1 228 71.5
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 2.2e-85 319.7 225 69.8
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.8e-85 319.3 270 61.9
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 3.7e-85 318.9 227 69.2
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.7e-85 318.9 227 69.2
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 6.3e-85 318.2 227 70.9
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.4e-84 317.0 228 70.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 3.1e-84 315.8 227 70.5
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 4.1e-84 315.5 225 68.4
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.2e-83 313.9 226 68.6
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.2e-83 313.9 242 65.7
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.5e-83 313.5 227 69.6
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 2.6e-83 312.8 225 68.0
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 4.5e-83 312.0 225 69.8
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 5.9e-83 311.6 223 67.7
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 7.7e-83 311.2 228 68.4
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.0e-82 308.5 227 68.7
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.1e-81 307.4 228 69.3
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.4e-81 307.0 228 67.1
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 5.5e-81 305.1 223 66.8
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.2e-80 303.9 227 68.3
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 2.1e-80 303.1 226 69.0
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 3.6e-80 302.4 228 68.0
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.4e-79 300.4 225 68.0
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.4e-79 300.4 225 66.7
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 3.0e-79 299.3 227 67.8
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.0e-78 296.6 230 67.4
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 3.3e-78 295.8 206 70.9
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 2.8e-77 292.7 225 66.7
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 3.7e-77 292.4 227 66.5
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 6.3e-77 291.6 228 65.8
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 1.5e-75 287.0 228 64.0
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 2.0e-75 286.6 229 63.8
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 4.7e-72 275.4 225 62.7
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 7.9e-72 274.6 225 61.8
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 2.3e-71 273.1 225 63.1
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 8.8e-71 271.2 187 71.1
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.3e-69 267.3 223 60.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.7e-69 266.9 225 61.3
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.7e-69 266.9 225 60.4
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.7e-69 266.9 225 61.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.7e-69 266.9 231 57.6
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 2.8e-69 266.2 225 60.4
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.8e-69 265.4 225 60.4
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 8.2e-69 264.6 225 60.0
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 7.0e-68 261.5 224 60.3
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.0e-67 260.0 225 63.1
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 4.5e-67 258.8 134 94.8
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.9e-67 258.5 225 61.8
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.7e-64 249.6 227 59.5
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.4e-63 247.3 225 60.9
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.0e-63 246.1 227 59.5
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 8.8e-63 244.6 187 66.8
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-62 244.2 227 59.5
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 5.7e-62 241.9 186 66.1
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 5.3e-60 235.3 230 51.7
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.1e-60 234.6 246 56.1
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 3.5e-59 232.6 228 52.6
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 5.9e-59 231.9 230 51.3
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.5e-57 227.3 258 51.2
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 9.4e-57 224.6 185 64.3
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 9.4e-57 224.6 228 54.4
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 1.0e-55 221.1 225 53.8
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 4.4e-54 215.7 173 63.0
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 3.5e-51 206.1 135 76.3
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.7e-50 203.8 223 47.5
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.4e-44 184.1 225 46.7
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.7e-43 179.9 228 45.2
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 5.0e-42 175.6 226 48.7
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.3e-39 166.8 91 94.5
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 8.6e-34 148.3 118 59.3
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 6.4e-29 132.1 93 65.6
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 4.0e-23 112.8 235 35.3
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 1.6e-19 100.9 101 53.5
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.8e-15 87.4 54 77.8
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 1.5e-14 84.3 198 32.3
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.3e-13 81.3 77 55.8
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 1.0e-10 71.6 38 86.8
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 2.8e-08 63.5 226 29.2


User provided reference genes

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