Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 6.3e-141 504.2 254 100.0
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 3.5e-139 498.4 254 98.0
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 3.5e-139 498.4 254 98.0
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 6.5e-138 494.2 254 97.2
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 6.5e-138 494.2 254 97.6
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 9.4e-137 490.3 254 96.9
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 9.4e-137 490.3 254 96.9
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 1.2e-136 490.0 254 96.9
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 1.6e-136 489.6 254 96.5
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 1.4e-135 486.5 254 95.3
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.8e-135 486.1 254 95.3
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 1.8e-135 486.1 254 94.9
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 4.0e-135 485.0 254 94.5
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 6.7e-135 484.2 254 96.1
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 8.8e-135 483.8 254 95.7
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.6e-134 482.3 253 95.7
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 4.4e-134 481.5 251 94.8
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 5.7e-134 481.1 254 93.7
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 9.7e-134 480.3 252 94.8
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 9.7e-134 480.3 252 95.2
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 9.7e-134 480.3 252 95.2
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 9.7e-134 480.3 252 95.2
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 2.8e-133 478.8 252 94.8
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 2.8e-133 478.8 251 93.6
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 3.7e-133 478.4 254 93.7
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 3.7e-133 478.4 251 93.6
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 3.7e-133 478.4 252 94.0
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 3.7e-133 478.4 252 94.8
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 8.2e-133 477.2 253 93.3
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 8.2e-133 477.2 254 93.3
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 8.2e-133 477.2 254 93.3
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 8.2e-133 477.2 254 93.7
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 3.1e-132 475.3 252 94.0
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 4.1e-132 474.9 254 93.3
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 4.1e-132 474.9 254 93.3
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 4.1e-132 474.9 253 93.3
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 5.3e-132 474.6 254 92.5
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 7.0e-132 474.2 254 92.1
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 9.1e-132 473.8 244 97.1
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 2.0e-131 472.6 254 91.3
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 2.0e-131 472.6 251 94.0
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.0e-131 472.6 254 91.3
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 2.7e-131 472.2 253 92.1
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 2.7e-131 472.2 252 93.3
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 3.5e-131 471.9 252 93.3
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 3.5e-131 471.9 254 91.3
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.5e-131 471.9 254 91.3
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 4.5e-131 471.5 254 91.7
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 5.9e-131 471.1 254 91.7
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 5.9e-131 471.1 254 92.5
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 7.7e-131 470.7 253 91.7
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 7.7e-131 470.7 254 91.3
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 7.7e-131 470.7 254 92.5
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.0e-130 470.3 254 91.7
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.3e-130 469.9 254 91.7
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.7e-130 469.5 254 90.9
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 2.9e-130 468.8 254 90.6
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 2.9e-130 468.8 254 92.1
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 2.9e-130 468.8 251 91.6
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.8e-130 468.4 254 90.9
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 3.8e-130 468.4 249 94.4
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 5.0e-130 468.0 254 91.7
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 6.5e-130 467.6 251 92.4
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 6.5e-130 467.6 254 92.1
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 1.5e-129 466.5 251 90.8
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 1.9e-129 466.1 253 91.3
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 5.5e-129 464.5 254 91.3
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 1.2e-128 463.4 251 90.4
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.2e-128 463.4 251 90.4
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.2e-128 463.4 251 90.4
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.2e-128 463.4 251 90.4
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 1.2e-128 463.4 253 89.7
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 1.2e-128 463.4 253 89.7
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 1.2e-128 463.4 253 89.7
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 1.6e-128 463.0 251 90.8
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.1e-128 462.6 252 91.7
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 3.6e-128 461.8 254 90.6
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 3.6e-128 461.8 247 92.3
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 4.7e-128 461.5 251 90.8
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 4.7e-128 461.5 253 89.7
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 6.1e-128 461.1 254 90.2
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 6.1e-128 461.1 254 90.2
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 8.0e-128 460.7 276 85.1
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 1.0e-127 460.3 251 90.0
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.3e-127 459.1 244 93.0
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 4.0e-127 458.4 251 89.6
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 1.5e-126 456.4 251 89.2
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 2.0e-126 456.1 247 91.1
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 7.5e-126 454.1 244 92.2
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.8e-126 453.8 282 81.9
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 1.3e-125 453.4 251 88.8
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.1e-124 450.3 254 90.9
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.1e-124 450.3 254 87.4
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.8e-124 449.5 244 90.2
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.4e-124 449.1 254 87.0
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 7.0e-124 447.6 254 86.6
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 6.5e-122 441.0 258 85.3
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.5e-121 439.9 240 89.2
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.9e-121 439.5 275 84.4
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 2.5e-121 439.1 254 83.9
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-116 423.3 253 84.2
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.8e-116 422.9 254 84.6
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.4e-116 422.5 231 88.7
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 4.1e-116 421.8 297 73.7
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 3.8e-114 415.2 251 80.5
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 1.5e-113 413.3 259 81.5
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 1.2e-110 403.7 210 98.1
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 2.6e-110 402.5 210 97.6
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 2.6e-110 402.5 270 77.4
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 2.4e-108 396.0 253 80.2
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 3.5e-107 392.1 254 79.5
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 2.5e-105 386.0 370 59.5
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 5.8e-102 374.8 224 83.5
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.8e-95 353.2 253 73.5
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 4.9e-93 345.1 253 68.0
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 2.5e-89 332.8 175 94.3
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 4.3e-89 332.0 170 94.7
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 1.4e-84 317.0 170 90.6
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 9.2e-84 314.3 177 87.0
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 1.4e-71 273.9 225 65.3
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 2.5e-65 253.1 134 96.3
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 1.2e-51 207.6 262 45.0
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 1.6e-51 207.2 181 68.0
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 8.8e-42 174.9 93 83.9
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 4.5e-38 162.5 80 92.5
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 5.1e-34 149.1 80 91.2
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 3.3e-33 146.4 137 62.8
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 3.3e-33 146.4 241 44.0
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 5.7e-33 145.6 107 72.0
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 3.7e-32 142.9 160 45.6
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.9e-28 130.6 70 88.6
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.4e-26 124.4 69 85.5
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 3.0e-26 123.2 64 87.5
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 3.0e-26 123.2 64 87.5
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 3.0e-26 123.2 62 87.1
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 7.5e-17 92.0 102 60.8
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.3e-16 91.3 47 97.9
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 3.7e-08 63.2 35 80.0
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 4.5e-06 56.2 74 51.4


User provided reference genes

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