Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26726 Trifolium pratense HOM05D000104 ORTHO05D003467 4.6e-200 701.0 361 100.0
TPR.G38889 Trifolium pratense HOM05D000104 ORTHO05D003467 2.5e-81 306.6 243 68.3
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 4.3e-65 252.7 246 56.9
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 7.4e-65 251.9 246 55.7
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 7.4e-65 251.9 246 56.9
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 7.4e-65 251.9 251 55.0
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 2.8e-64 250.0 257 54.1
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 6.2e-64 248.8 251 54.6
Atru.chr7.2524 Acer truncatum HOM05D000104 ORTHO05D003467 8.1e-64 248.4 259 53.3
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 1.1e-63 248.1 263 54.0
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 1.1e-63 248.1 246 54.9
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 1.4e-63 247.7 251 53.8
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 1.4e-63 247.7 240 57.1
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 1.4e-63 247.7 246 52.0
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 1.8e-63 247.3 252 54.0
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 1.8e-63 247.3 247 55.1
Gorai.001G036900 Gossypium raimondii HOM05D000104 ORTHO05D003467 1.8e-63 247.3 247 55.1
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 2.4e-63 246.9 247 54.3
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 2.4e-63 246.9 247 52.6
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 3.1e-63 246.5 252 53.2
Gohir.A07G031300 Gossypium hirsutum HOM05D000104 ORTHO05D003467 4.0e-63 246.1 247 55.1
Peaxi162Scf00632g00012 Petunia axillaris HOM05D000104 ORTHO05D003467 5.3e-63 245.7 252 52.8
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 5.3e-63 245.7 252 53.6
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 6.9e-63 245.4 263 52.5
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 6.9e-63 245.4 257 52.9
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 9.0e-63 245.0 274 51.5
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 9.0e-63 245.0 246 52.4
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 1.2e-62 244.6 246 54.9
Medtr1g013190 Medicago truncatula HOM05D000104 ORTHO05D003467 1.5e-62 244.2 252 54.8
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 2.6e-62 243.4 251 53.8
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 2.6e-62 243.4 251 54.2
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 5.8e-62 242.3 249 54.2
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 5.8e-62 242.3 245 53.9
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 7.6e-62 241.9 244 54.9
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 7.6e-62 241.9 256 50.4
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 7.6e-62 241.9 246 51.2
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 1.0e-61 241.5 261 52.5
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 1.3e-61 241.1 270 50.0
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 1.7e-61 240.7 247 51.8
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 2.9e-61 240.0 241 54.4
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 2.9e-61 240.0 246 50.8
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 3.8e-61 239.6 261 52.5
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 4.9e-61 239.2 255 51.8
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 8.4e-61 238.4 243 54.7
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 1.4e-60 237.7 255 50.2
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 1.4e-60 237.7 247 52.2
Cpa.g.sc127.15 Carica papaya HOM05D000104 ORTHO05D003467 1.9e-60 237.3 245 51.0
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 1.9e-60 237.3 251 53.0
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 1.9e-60 237.3 241 53.5
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 2.5e-60 236.9 244 52.0
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 3.2e-60 236.5 248 51.2
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 4.2e-60 236.1 245 51.8
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 7.1e-60 235.3 263 50.2
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 9.3e-60 235.0 246 50.4
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 1.2e-59 234.6 242 54.1
FAN20G2022 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.2e-59 234.6 244 51.6
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.1e-59 233.8 246 51.2
FAN27G0005 Fragaria x ananassa HOM05D000104 ORTHO05D003467 2.1e-59 233.8 244 51.6
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 2.1e-59 233.8 241 52.3
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 3.5e-59 233.0 244 51.6
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 3.5e-59 233.0 248 50.4
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 4.6e-59 232.6 251 51.0
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 4.6e-59 232.6 255 50.2
Solyc08g029130.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 7.9e-59 231.9 250 50.8
Sopen08g010020 Solanum pennellii HOM05D000104 ORTHO05D003467 7.9e-59 231.9 250 50.8
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 1.0e-58 231.5 238 52.9
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 1.8e-58 230.7 245 51.4
Lalb_Chr22g0361401 Lupinus albus HOM05D000104 ORTHO05D003467 1.8e-58 230.7 258 50.0
Hund03464 Selenicereus undatus HOM05D000104 ORTHO05D003467 1.8e-58 230.7 238 52.1
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 3.0e-58 229.9 246 52.0
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 3.9e-58 229.6 246 50.4
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 5.1e-58 229.2 258 49.6
EL10Ac2g04134 Beta vulgaris HOM05D000104 ORTHO05D003467 6.7e-58 228.8 246 50.8
DCAR_003002 Daucus carota HOM05D000104 ORTHO05D003467 6.7e-58 228.8 253 49.8
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 6.7e-58 228.8 243 51.4
Nitab4.5_0002503g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.1e-57 228.0 256 49.2
FAN15G1888 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.9e-57 227.3 251 49.8
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 1.9e-57 227.3 258 49.2
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 2.5e-57 226.9 245 51.0
AUR62031587 Chenopodium quinoa HOM05D000104 ORTHO05D003467 7.4e-57 225.3 246 50.0
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 9.6e-57 224.9 253 49.0
Sc09g0010480 Simmondsia chinensis HOM05D000104 ORTHO05D003467 1.3e-56 224.6 237 51.9
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.3e-56 224.6 296 44.9
AUR62012463 Chenopodium quinoa HOM05D000104 ORTHO05D003467 1.6e-56 224.2 246 50.0
Solyc06g065730.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 1.6e-56 224.2 256 48.8
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 1.6e-56 224.2 256 48.8
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 2.1e-56 223.8 243 50.2
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 4.8e-56 222.6 244 51.2
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 4.8e-56 222.6 244 51.2
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 6.3e-56 222.2 244 50.8
Ah.10g035570 Amaranthus hybridus HOM05D000104 ORTHO05D003467 8.2e-56 221.9 238 51.3
Nitab4.5_0002973g0030 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.1e-55 221.5 260 49.2
Carub.0004s0475 Capsella rubella HOM05D000104 ORTHO05D003467 5.3e-55 219.2 244 50.4
MD15G1037700 Malus domestica HOM05D000104 ORTHO05D003467 6.9e-55 218.8 246 48.8
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 9.0e-55 218.4 244 50.8
Phvul.001G046100 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 9.0e-55 218.4 239 49.4
Hund19597 Selenicereus undatus HOM05D000104 ORTHO05D003467 9.0e-55 218.4 246 48.4
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 1.2e-54 218.0 244 50.8
VMungo0647G2573 Vigna mungo HOM05D000104 ORTHO05D003467 1.2e-54 218.0 250 48.0
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 1.5e-54 217.6 244 51.2
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 1.5e-54 217.6 244 51.2
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 1.5e-54 217.6 244 51.2
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.5e-54 217.6 248 49.6
RcHm_v2.0_Chr6g0299661 Rosa chinensis HOM05D000104 ORTHO05D003467 2.6e-54 216.9 250 49.6
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 3.4e-54 216.5 244 50.8
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 3.4e-54 216.5 244 50.8
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 3.4e-54 216.5 244 50.8
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 4.5e-54 216.1 241 49.8
CARHR116490 Cardamine hirsuta HOM05D000104 ORTHO05D003467 5.9e-54 215.7 244 50.0
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 5.9e-54 215.7 294 44.2
MD08G1058800 Malus domestica HOM05D000104 ORTHO05D003467 7.6e-54 215.3 253 46.6
Ah.16g104930 Amaranthus hybridus HOM05D000104 ORTHO05D003467 1.3e-53 214.5 234 50.9
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 1.3e-53 214.5 258 45.7
CDE06G2391 Ceratophyllum demersum HOM05D000104 ORTHO05D003467 4.2e-52 209.5 244 45.9
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 3.6e-51 206.5 295 42.7
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 1.0e-50 204.9 246 45.9
RcHm_v2.0_Chr3g0455421 Rosa chinensis HOM05D000104 ORTHO05D003467 5.3e-47 192.6 234 46.6
THA.LOC104804837 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 2.0e-46 190.7 232 44.8
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 1.3e-45 188.0 252 44.4
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 5.0e-45 186.0 238 43.7
vmacro05139 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 9.4e-44 181.8 248 41.9
Mapoly0010s0012 Marchantia polymorpha HOM05D000104 ORTHO05D003467 7.9e-43 178.7 233 45.1
Actinidia22307 Actinidia chinensis HOM05D000104 ORTHO05D003467 2.3e-42 177.2 246 43.5
TPR.G25705 Trifolium pratense HOM05D002753 ORTHO05D003467 2.3e-42 177.2 236 48.3
TWI32G1204 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 5.1e-42 176.0 238 44.1
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 5.1e-42 176.0 452 30.3
Sp7g29720 Schrenkiella parvula HOM05D000104 ORTHO05D003467 1.1e-41 174.9 250 40.8
Thhalv10027006m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 2.0e-41 174.1 255 40.4
Pp3c18_19040 Physcomitrium patens HOM05D000104 ORTHO05D003467 3.1e-39 166.8 243 40.7
Pp3c18_19045 Physcomitrium patens HOM05D000104 ORTHO05D003467 3.1e-39 166.8 243 40.7
Pp3c21_10800 Physcomitrium patens HOM05D000104 ORTHO05D003467 3.1e-39 166.8 243 40.7
Gohir.D13G187900 Gossypium hirsutum HOM05D000104 ORTHO05D003467 2.6e-38 163.7 118 70.3
Oeu000758.1 Olea europaea HOM05D000104 ORTHO05D003467 1.7e-37 161.0 197 48.2
SMO228G0183 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 1.7e-37 161.0 250 39.2
SMO200G0085 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 2.2e-37 160.6 258 37.2
Nitab4.5_0000486g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 9.4e-36 155.2 115 67.8
C07p58980 Brassica napus HOM05D000104 ORTHO05D003467 1.2e-35 154.8 235 40.4
SGA_v2.0_scaffold20G09081 Striga asiatica HOM05D000104 ORTHO05D003467 7.9e-35 152.1 258 38.0
A03p61110 Brassica napus HOM05D000104 ORTHO05D003467 3.0e-34 150.2 236 39.4
THA.LOC104804839 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 3.9e-34 149.8 201 42.3
C01p06980 Brassica napus HOM05D000104 ORTHO05D003467 1.5e-33 147.9 242 38.8
BcaC09g51983 Brassica carinata HOM05D000104 ORTHO05D003467 1.3e-32 144.8 243 38.3
BolC1t00694H Brassica oleracea HOM05D000104 ORTHO05D003467 3.7e-32 143.3 243 38.3
A01p06320 Brassica napus HOM05D000104 ORTHO05D003467 6.3e-32 142.5 242 38.0
A01p06340 Brassica napus HOM05D000104 ORTHO05D003467 6.3e-32 142.5 253 37.5
BraA01t00598Z Brassica rapa HOM05D000104 ORTHO05D003467 6.3e-32 142.5 242 38.0
HPP92_004615 Vanilla planifolia HOM05D000104 ORTHO05D003467 8.2e-32 142.1 211 39.3
AT4G31900 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 1.8e-31 141.0 245 32.7
Os06g0183800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D003467 1.8e-31 141.0 245 35.5
C01p07000 Brassica napus HOM05D000104 ORTHO05D003467 2.4e-31 140.6 253 37.2
BcaC09g51981 Brassica carinata HOM05D000104 ORTHO05D003467 3.1e-31 140.2 253 37.2
COL.COLO4_18936 Corchorus olitorius HOM05D000104 ORTHO05D003467 2.0e-30 137.5 170 49.4
BraA01t00599Z Brassica rapa HOM05D000104 ORTHO05D003467 1.0e-29 135.2 261 36.4
BolC1t00695H Brassica oleracea HOM05D000104 ORTHO05D003467 1.7e-29 134.4 261 36.0
AL7G20000 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 2.9e-29 133.7 232 33.2
Carub.0007s0864 Capsella rubella HOM05D000104 ORTHO05D003467 1.6e-27 127.9 251 32.7
AL7G19990 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 1.4e-26 124.8 244 34.0
CBR_g16815 Chara braunii HOM05D000104 ORTHO05D003467 4.0e-26 123.2 210 37.1
Actinidia13200 Actinidia chinensis HOM05D000104 ORTHO05D003467 5.0e-21 106.3 77 63.6
Nitab4.5_0000486g0100 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.1e-20 105.1 83 61.4
COL.COLO4_18937 Corchorus olitorius HOM05D000104 ORTHO05D003467 4.7e-19 99.8 58 75.9
BolC7t46345H Brassica oleracea HOM05D000104 ORTHO05D003467 1.8e-18 97.8 235 32.3
BraA03t15150Z Brassica rapa HOM05D000104 ORTHO05D003467 2.0e-17 94.4 236 31.8
SEGI_08777 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 3.6e-11 73.6 65 46.2
HPP92_004610 Vanilla planifolia HOM05D000104 ORTHO05D003467 6.1e-11 72.8 64 50.0
Actinidia22434 Actinidia chinensis HOM05D002462 ORTHO05D002893 4.0e-10 70.1 45 64.4
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 1.5e-09 68.2 119 42.0
VMungo0002G0001 Vigna mungo HOM05D000104 ORTHO05D003467 3.4e-09 67.0 86 44.2
Actinidia16922 Actinidia chinensis HOM05D000104 ORTHO05D003467 4.4e-09 66.6 41 65.9
Haze_26150 Corylus avellana HOM05D000104 ORTHO05D003467 4.4e-09 66.6 111 37.8
Oeu000760.1 Olea europaea HOM05D000104 ORTHO05D003467 1.3e-08 65.1 52 53.8
HPP92_004609 Vanilla planifolia HOM05D000104 ORTHO05D003467 8.3e-08 62.4 84 42.9
AagrBONN_evm.TU.Sc2ySwM_344.1528 Anthoceros agrestis HOM05D000104 ORTHO05D003467 7.8e-06 55.8 102 31.4


User provided reference genes

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