Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23233 Trifolium pratense HOM05D004465 ORTHO05D005450 6.0e-68 260.8 136 100.0
Medtr4g121550 Medicago truncatula HOM05D004465 ORTHO05D005450 2.2e-62 242.3 131 95.4
Psat4g023240 Pisum sativum HOM05D004465 ORTHO05D005450 1.1e-61 240.0 131 94.7
Ca_09695_v3 Cicer arietinum L. HOM05D004465 ORTHO05D005450 2.4e-61 238.8 131 94.7
Lj1g0001578 Lotus japonicus HOM05D004465 ORTHO05D005450 5.1e-59 231.1 131 90.1
Phvul.001G147600 Phaseolus vulgaris HOM05D004465 ORTHO05D005450 7.3e-58 227.3 131 89.3
Glyma.19G152700 Glycine max HOM05D004465 ORTHO05D005450 2.1e-57 225.7 131 89.3
VMungo1383G2558 Vigna mungo HOM05D004465 ORTHO05D005450 6.2e-57 224.2 131 89.3
arahy.Tifrunner.gnm1.ann1.CV9AIL Arachis hypogaea HOM05D004465 ORTHO05D005450 2.0e-55 219.2 131 84.7
Cfa006082 Carpinus fangiana HOM05D004465 ORTHO05D005450 3.4e-55 218.4 131 84.0
Haze_04767 Corylus avellana HOM05D004465 ORTHO05D005450 3.4e-55 218.4 131 84.0
arahy.Tifrunner.gnm1.ann1.N9UI87 Arachis hypogaea HOM05D004465 ORTHO05D005450 2.2e-54 215.7 131 83.2
CiPaw.08G102200 Carya illinoinensis HOM05D004465 ORTHO05D005450 4.9e-54 214.5 131 80.9
Prupe.8G247600 Prunus persica HOM05D004465 ORTHO05D005450 9.3e-53 210.3 131 77.9
MD03G1271400 Malus domestica HOM05D004465 ORTHO05D005450 1.6e-52 209.5 131 77.1
Actinidia24311 Actinidia chinensis HOM05D004465 ORTHO05D005450 2.1e-52 209.1 131 77.1
CSS0050172 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 2.1e-52 209.1 131 77.9
Lalb_Chr12g0205491 Lupinus albus HOM05D004465 ORTHO05D005450 2.1e-52 209.1 132 81.8
Dinv32970 Davidia involucrata HOM05D004465 ORTHO05D005450 2.7e-52 208.8 131 76.3
GSVIVG01011064001 Vitis vinifera HOM05D004465 ORTHO05D005450 2.7e-52 208.8 131 77.9
CSS0023645 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 4.6e-52 208.0 131 77.1
Duzib264G0721 Durio zibethinus HOM05D004465 ORTHO05D005450 4.6e-52 208.0 131 78.6
RcHm_v2.0_Chr6g0291951 Rosa chinensis HOM05D004465 ORTHO05D005450 4.6e-52 208.0 131 77.9
CANSAT25G0403 Cannabis sativa HOM05D004465 ORTHO05D005450 7.8e-52 207.2 131 77.1
FvH4_2g24140 Fragaria vesca HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 77.1
FAN20G2589 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 77.1
FAN24G2543 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 77.1
HanXRQChr15g0466601 Helianthus annuus HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 77.1
PGR119G1155 Punica granatum HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 75.6
TAR633G0251 Trochodendron aralioides HOM05D004465 ORTHO05D005450 1.0e-51 206.8 136 73.5
vmacro02540 Vaccinium macrocarpon HOM05D004465 ORTHO05D005450 1.0e-51 206.8 131 76.3
ClCG04G004880 Citrullus lanatus HOM05D004465 ORTHO05D005450 1.3e-51 206.5 131 77.1
Eucgr.H01542 Eucalyptus grandis HOM05D004465 ORTHO05D005450 1.3e-51 206.5 131 77.9
Lalb_Chr21g0313041 Lupinus albus HOM05D004465 ORTHO05D005450 1.7e-51 206.1 132 81.8
MD11G1292000 Malus domestica HOM05D004465 ORTHO05D005450 1.7e-51 206.1 131 75.6
Hma1.2p1_0628F.1_g191790 Hydrangea macrophylla HOM05D004465 ORTHO05D005450 2.3e-51 205.7 131 75.6
Lju41A26G23 Lonicera japonica HOM05D004465 ORTHO05D005450 2.3e-51 205.7 126 79.4
Thecc.01G117300 Theobroma cacao HOM05D004465 ORTHO05D005450 2.3e-51 205.7 131 76.3
FAN15G3052 Fragaria x ananassa HOM05D004465 ORTHO05D005450 3.0e-51 205.3 131 76.3
FAN27G1503 Fragaria x ananassa HOM05D004465 ORTHO05D005450 3.9e-51 204.9 131 76.3
Manes.17G011600 Manihot esculenta HOM05D004465 ORTHO05D005450 3.9e-51 204.9 131 74.8
Hund26620 Selenicereus undatus HOM05D004465 ORTHO05D005450 3.9e-51 204.9 131 75.6
Sed0001639 Sechium edule HOM05D004465 ORTHO05D005450 5.1e-51 204.5 131 75.6
Gohir.D11G226800 Gossypium hirsutum HOM05D004465 ORTHO05D005450 6.6e-51 204.1 131 75.6
Gorai.002G150000 Gossypium raimondii HOM05D004465 ORTHO05D005450 6.6e-51 204.1 131 75.6
Psat3g002760 Pisum sativum HOM05D004465 ORTHO05D005450 6.6e-51 204.1 134 80.6
CANSAT25G2682 Cannabis sativa HOM05D004465 ORTHO05D005450 8.7e-51 203.8 131 76.3
Gohir.A11G223700 Gossypium hirsutum HOM05D004465 ORTHO05D005450 8.7e-51 203.8 131 75.6
MELO3C008880.2 Cucumis melo HOM05D004465 ORTHO05D005450 1.5e-50 203.0 132 75.0
Gohir.A10G082900 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.5e-50 203.0 131 74.8
Gohir.D10G105100 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.5e-50 203.0 131 74.8
Sabra03G0145100 Salix brachista HOM05D004465 ORTHO05D005450 1.5e-50 203.0 134 72.4
Lsat_1_v5_gn_2_2880 Lactuca sativa HOM05D004465 ORTHO05D005450 1.9e-50 202.6 132 78.0
THA.LOC104815950 Tarenaya hassleriana HOM05D004465 ORTHO05D005450 1.9e-50 202.6 131 74.8
Duzib147G0102 Durio zibethinus HOM05D004465 ORTHO05D005450 3.3e-50 201.8 131 76.3
Aa31LG3G11130 Aethionema arabicum HOM05D004465 ORTHO05D005450 5.6e-50 201.1 131 73.3
Oeu047890.1 Olea europaea HOM05D004465 ORTHO05D005450 5.6e-50 201.1 131 75.6
Sc14g0002440 Simmondsia chinensis HOM05D004465 ORTHO05D005450 5.6e-50 201.1 131 74.8
Oeu006227.1 Olea europaea HOM05D004465 ORTHO05D005450 9.6e-50 200.3 131 75.6
Ah.01g002340 Amaranthus hybridus HOM05D004465 ORTHO05D005450 1.6e-49 199.5 131 74.0
AT1G03360 Arabidopsis thaliana HOM05D004465 ORTHO05D005450 1.6e-49 199.5 131 71.8
COL.COLO4_22372 Corchorus olitorius HOM05D004465 ORTHO05D005450 1.6e-49 199.5 131 73.3
CsaV3_4G031760 Cucumis sativus L. HOM05D004465 ORTHO05D005450 1.6e-49 199.5 131 74.0
Carub.0001s0248 Capsella rubella HOM05D004465 ORTHO05D005450 2.1e-49 199.1 131 71.8
AL1G12880 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 4.8e-49 198.0 131 71.0
Aqoxy2G03197 Aquilegia oxysepala HOM05D004465 ORTHO05D005450 6.2e-49 197.6 133 72.9
Psat4g225440 Pisum sativum HOM05D004465 ORTHO05D005450 6.2e-49 197.6 131 80.2
ECA247G0279 Erigeron canadensis HOM05D004465 ORTHO05D005450 8.1e-49 197.2 130 73.8
Cc04_g13300 Coffea canephora HOM05D004465 ORTHO05D005450 1.1e-48 196.8 133 72.2
BcaC05g24540 Brassica carinata HOM05D004465 ORTHO05D005450 1.4e-48 196.4 131 71.8
A10p01910 Brassica napus HOM05D004465 ORTHO05D005450 1.4e-48 196.4 131 71.8
Migut.D00252 Erythranthe guttata HOM05D004465 ORTHO05D005450 1.4e-48 196.4 131 74.0
TWI14G0547 Tripterygium wilfordii HOM05D004465 ORTHO05D005450 1.8e-48 196.1 131 71.0
PSO302G0160 Papaver somniferum HOM05D004465 ORTHO05D005450 2.4e-48 195.7 134 68.7
Potri.003G194400 Populus trichocarpa HOM05D004465 ORTHO05D005450 2.4e-48 195.7 131 71.0
BraA10t42464Z Brassica rapa HOM05D004465 ORTHO05D005450 3.1e-48 195.3 131 71.0
QL02p002453 Quercus lobata HOM05D004465 ORTHO05D005450 4.0e-48 194.9 133 75.9
TPR.G11548 Trifolium pratense HOM05D004465 ORTHO05D005450 4.0e-48 194.9 131 81.7
Sp1g02360 Schrenkiella parvula HOM05D004465 ORTHO05D005450 5.3e-48 194.5 131 70.2
BolC5t28966H Brassica oleracea HOM05D004465 ORTHO05D005450 6.9e-48 194.1 131 71.0
PSO170G6090 Papaver somniferum HOM05D004465 ORTHO05D005450 6.9e-48 194.1 134 67.9
Nn1g08362 Nelumbo nucifera HOM05D004465 ORTHO05D005450 9.0e-48 193.7 132 72.7
Aa31LG1G9210 Aethionema arabicum HOM05D004465 ORTHO05D005450 1.5e-47 193.0 141 68.1
MSTRG.21585 Avicennia marina HOM05D004465 ORTHO05D005450 1.5e-47 193.0 131 71.8
CARHR002730 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.5e-47 193.0 131 68.7
Thhalv10008200m.g Eutrema salsugineum HOM05D004465 ORTHO05D005450 1.5e-47 193.0 131 69.5
Atru.chr5.1333 Acer truncatum HOM05D004465 ORTHO05D005450 2.0e-47 192.6 131 71.8
BcaC05g24533 Brassica carinata HOM05D001540 ORTHO05D001520 3.4e-47 191.8 131 69.5
unitig_0.g1195 Utricularia gibba HOM05D004465 ORTHO05D005450 7.6e-47 190.7 133 67.7
CDE05G1996 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 9.9e-47 190.3 131 67.9
MBI19_g15845_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 1.7e-46 189.5 135 71.1
Psat5g228640 Pisum sativum HOM05D004465 ORTHO05D005450 2.2e-46 189.1 102 91.2
Zm00001eb067490 Zea mays HOM05D004465 ORTHO05D005450 2.2e-46 189.1 131 69.5
BcaC05g24537 Brassica carinata HOM05D004465 ORTHO05D005450 3.8e-46 188.3 132 69.7
AUR62006497 Chenopodium quinoa HOM05D004465 ORTHO05D005450 3.8e-46 188.3 131 68.7
MELO3C026181.2 Cucumis melo HOM05D004465 ORTHO05D005450 3.8e-46 188.3 131 69.5
Ciclev10021133m.g Citrus clementina HOM05D004465 ORTHO05D005450 6.4e-46 187.6 131 69.5
AUR62025039 Chenopodium quinoa HOM05D004465 ORTHO05D005450 8.4e-46 187.2 131 67.9
CAN.G956.9 Capsicum annuum HOM05D004465 ORTHO05D005450 1.4e-45 186.4 132 69.7
Os04g0520000 Oryza sativa ssp. japonica HOM05D004465 ORTHO05D005450 1.4e-45 186.4 131 69.5
ClCG06G018160 Citrullus lanatus HOM05D004465 ORTHO05D005450 1.9e-45 186.0 131 72.5
Nitab4.5_0001323g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 5.4e-45 184.5 131 70.2
Nitab4.5_0002927g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 5.4e-45 184.5 131 70.2
Cpa.g.sc9.125 Carica papaya HOM05D004465 ORTHO05D005450 7.1e-45 184.1 129 71.3
Lsat_1_v5_gn_9_1881 Lactuca sativa HOM05D004465 ORTHO05D005450 9.3e-45 183.7 131 73.3
PGSC0003DMG400003807 Solanum tuberosum HOM05D004465 ORTHO05D005450 1.2e-44 183.3 131 70.2
Solyc09g074090.3 Solanum lycopersicum HOM05D004465 ORTHO05D005450 3.5e-44 181.8 131 69.5
SHI31141 Sapria himalayana HOM05D004465 ORTHO05D000001 1.3e-43 179.9 127 64.6
Sopen09g028910 Solanum pennellii HOM05D004465 ORTHO05D005450 2.3e-43 179.1 131 68.7
Lsat_1_v5_gn_2_2860 Lactuca sativa HOM05D004465 ORTHO05D005450 1.5e-42 176.4 129 71.3
SEGI_29460 Sequoiadendron giganteum HOM05D004465 ORTHO05D005450 1.3e-41 173.3 131 63.4
ATR0626G226 Amborella trichopoda HOM05D004465 ORTHO05D005450 1.6e-41 172.9 131 66.4
SalBow3G2805 Salvia bowleyana HOM05D004465 ORTHO05D005450 1.6e-41 172.9 162 56.8
Actinidia00724 Actinidia chinensis HOM05D004465 ORTHO05D005450 7.6e-39 164.1 131 63.4
Peaxi162Scf00941g00114 Petunia axillaris HOM05D004465 ORTHO05D005450 2.9e-38 162.2 128 63.3
Gorai.011G114800 Gossypium raimondii HOM05D004465 ORTHO05D005450 3.0e-35 152.1 131 61.1
Mapoly0036s0012 Marchantia polymorpha HOM05D004465 ORTHO05D005450 3.7e-33 145.2 131 54.2
Carub.0002s0706 Capsella rubella HOM05D004465 ORTHO05D005450 4.0e-32 141.7 130 56.9
Rhsim13G0021500 Rhododendron simsii HOM05D004465 ORTHO05D005450 5.3e-32 141.4 79 81.0
HPP92_017959 Vanilla planifolia HOM05D004465 ORTHO05D005450 5.3e-32 141.4 131 55.0
Glyma.17G181200 Glycine max HOM05D004465 ORTHO05D005450 2.6e-31 139.0 82 81.7
SMO351G0040 Selaginella moellendorffii HOM05D004465 ORTHO05D005450 1.3e-30 136.7 98 63.3
AL1G67150 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 1.1e-29 133.7 128 57.0
CBR_g31324 Chara braunii HOM05D004465 ORTHO05D000002 1.1e-29 133.7 126 50.8
CsaV3_1G000270 Cucumis sativus L. HOM05D004465 ORTHO05D005450 1.4e-29 133.3 124 54.0
TPR.G16860 Trifolium pratense HOM05D004465 ORTHO05D005450 9.3e-29 130.6 68 98.5
CARHR054000 Cardamine hirsuta HOM05D004465 ORTHO05D005450 2.1e-28 129.4 130 53.1
Pp3c3_30640 Physcomitrium patens HOM05D004465 ORTHO05D005450 1.1e-26 123.6 126 46.8
MBI19_g08244_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 2.2e-25 119.4 117 52.1
Lj1A45T35 Lonicera japonica HOM05D004465 ORTHO05D005450 1.1e-24 117.1 82 70.7
EL10Ac9g22404 Beta vulgaris HOM05D004465 ORTHO05D005450 1.4e-24 116.7 131 48.9
Cre12.g496450 Chlamydomonas reinhardtii HOM05D004465 ORTHO05D005450 6.9e-24 114.4 112 46.4
CARHR054740 Cardamine hirsuta HOM05D004465 ORTHO05D005450 6.5e-22 107.8 138 45.7
Medtr2g093790 Medicago truncatula HOM05D004465 ORTHO05D005450 7.2e-21 104.4 131 52.7
MCO01G628 Micromonas commoda HOM05D004465 ORTHO05D005450 1.8e-16 89.7 84 51.2
Cfa025641 Carpinus fangiana HOM05D004465 ORTHO05D005450 1.1e-13 80.5 86 43.0
Haze_26173 Corylus avellana HOM05D004465 ORTHO05D005450 3.2e-13 79.0 84 45.2
PRCOL_00003283 Prasinoderma coloniale HOM05D004465 ORTHO05D005450 8.2e-09 64.3 82 41.5


User provided reference genes

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