Gene: TPR.G16860
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G16860
- Transcript Identifier TPR.T17443
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG4 : 13289042-13295355 : negative
Gene Family Information
- ID HOM05D004465
- #Genes/#Species 161/99
- Phylogenetic origin
- ID ORTHO05D005450
- #Genes/#Species 157/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA17443.v2
- id Tp57577_TGAC_v2_gene16860.v2
- pacid 35964874
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000460 | ISO | PLAZA Integrative Orthology | maturation of 5.8S rRNA | AT1G03360 |
| GO:0060149 | ISO | PLAZA Integrative Orthology | negative regulation of posttranscriptional gene silencing | AT1G03360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000178 | IEA | InterPro | exosome (RNase complex) | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G03360 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G03360 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT1G03360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR026699 | Exosome complex RNA-binding protein 1/RRP40/RRP4 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |