Gene: BcaC05g24533
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC05g24533
- Transcript Identifier BcaC05g24533
- Gene Type Coding gene
- Location ChrC05 : 1667922-1685514 : negative
Gene Family Information
- ID HOM05D001540
- #Genes/#Species 414/97
- Phylogenetic origin
- ID ORTHO05D001520
- #Genes/#Species 394/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006914 | IEA | InterPro | autophagy | |
| GO:0042594 | ISO | PLAZA Integrative Orthology | response to starvation | AT1G03380 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR045142 | BCAS3-like |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR036612 | K Homology domain, type 1 superfamily |
| IPR022175 | BCAS3 domain |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR004088 | K Homology domain, type 1 |
| Mapman id | Description |
|---|---|
| 16.4.1.1.7 | RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP4 |
| 19.2.2.1.4.3.7 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (PIR) |
| 19.3.3.5.1.3 | Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18 |