Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 2.8e-27 124.4 57 100.0
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 8.2e-27 122.9 57 96.5
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.7e-24 115.2 57 84.2
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 5.5e-23 110.2 53 92.5
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 5.5e-23 110.2 55 89.1
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 7.1e-23 109.8 56 87.5
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.2e-22 109.0 51 98.0
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 1.2e-22 109.0 52 96.2
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 1.2e-22 109.0 52 96.2
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 1.2e-22 109.0 52 96.2
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 2.1e-22 108.2 51 98.0
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 2.7e-22 107.8 52 94.2
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 2.7e-22 107.8 52 94.2
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 3.5e-22 107.5 52 92.3
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 4.6e-22 107.1 57 75.4
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 6.0e-22 106.7 52 90.4
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 7.9e-22 106.3 53 90.6
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 7.9e-22 106.3 55 85.5
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 1.3e-21 105.5 51 92.2
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 1.3e-21 105.5 52 90.4
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 1.8e-21 105.1 52 90.4
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 1.8e-21 105.1 52 94.2
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 3.0e-21 104.4 52 86.5
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 3.0e-21 104.4 52 90.4
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 3.9e-21 104.0 54 85.2
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 5.1e-21 103.6 49 95.9
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 5.1e-21 103.6 52 88.5
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 5.1e-21 103.6 50 90.0
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 6.7e-21 103.2 51 88.2
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 6.7e-21 103.2 51 88.2
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 6.7e-21 103.2 57 71.9
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 6.7e-21 103.2 50 90.0
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 8.7e-21 102.8 51 86.3
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 8.7e-21 102.8 50 88.0
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 8.7e-21 102.8 50 90.0
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 8.7e-21 102.8 50 90.0
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 1.1e-20 102.4 50 88.0
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.1e-20 102.4 50 88.0
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.1e-20 102.4 50 88.0
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 1.1e-20 102.4 50 88.0
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.5e-20 102.1 52 82.7
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.5e-20 102.1 51 88.2
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 1.9e-20 101.7 51 80.4
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 1.9e-20 101.7 50 88.0
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 2.5e-20 101.3 49 91.8
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.5e-20 101.3 52 82.7
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 2.5e-20 101.3 51 90.2
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 2.5e-20 101.3 50 88.0
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 2.5e-20 101.3 50 88.0
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 2.5e-20 101.3 50 90.0
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.5e-20 101.3 52 84.6
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 4.3e-20 100.5 52 82.7
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 4.3e-20 100.5 52 82.7
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 5.7e-20 100.1 50 88.0
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 7.4e-20 99.8 50 84.0
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 9.7e-20 99.4 51 84.3
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 9.7e-20 99.4 50 86.0
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 9.7e-20 99.4 50 86.0
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 9.7e-20 99.4 50 86.0
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 1.3e-19 99.0 51 84.3
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 1.6e-19 98.6 51 82.4
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 2.2e-19 98.2 55 76.4
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 2.8e-19 97.8 49 87.8
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 2.8e-19 97.8 49 87.8
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 2.8e-19 97.8 50 88.0
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 3.7e-19 97.4 51 76.5
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 3.7e-19 97.4 50 84.0
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 3.7e-19 97.4 49 83.7
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 3.7e-19 97.4 49 87.8
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 3.7e-19 97.4 50 88.0
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 3.7e-19 97.4 57 71.9
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 4.8e-19 97.1 50 88.0
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 6.3e-19 96.7 50 82.0
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 8.2e-19 96.3 50 86.0
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 1.1e-18 95.9 51 80.4
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 1.1e-18 95.9 51 80.4
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.4e-18 95.5 47 91.5
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 1.4e-18 95.5 47 89.4
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 1.8e-18 95.1 50 80.0
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 2.4e-18 94.7 47 87.2
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 3.1e-18 94.4 47 91.5
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 3.1e-18 94.4 47 91.5
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 3.1e-18 94.4 47 91.5
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 3.1e-18 94.4 47 91.5
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 3.1e-18 94.4 47 89.4
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 3.1e-18 94.4 50 80.0
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 4.1e-18 94.0 46 89.1
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 5.3e-18 93.6 48 83.3
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 6.9e-18 93.2 47 89.4
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 6.9e-18 93.2 51 80.4
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 9.0e-18 92.8 47 87.2
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 9.0e-18 92.8 47 89.4
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.0e-18 92.8 47 89.4
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.0e-18 92.8 47 89.4
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 9.0e-18 92.8 49 77.6
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 2.0e-17 91.7 48 85.4
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 2.6e-17 91.3 47 85.1
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 2.6e-17 91.3 47 85.1
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.4e-17 90.9 46 89.1
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 4.5e-17 90.5 45 86.7
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.0e-16 89.4 47 85.1
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.2e-16 88.2 44 86.4
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.2e-16 88.2 44 86.4
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 2.2e-16 88.2 44 86.4
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 2.2e-16 88.2 44 86.4
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 3.8e-16 87.4 44 86.4
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 5.0e-16 87.0 50 72.0
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 8.5e-16 86.3 44 84.1
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 1.4e-15 85.5 57 71.9
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.6e-14 82.0 40 77.5
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 1.1e-12 75.9 71 54.9
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 7.4e-12 73.2 39 84.6
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 2.2e-11 71.6 46 60.9
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 4.5e-09 63.9 50 50.0


User provided reference genes

Program Settings