Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1402 Trochodendron aralioides HOM05D000329 ORTHO05D000833 2.8e-42 174.9 87 100.0
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 8.3e-23 110.2 84 66.7
PSO302G0151 Papaver somniferum HOM05D000329 ORTHO05D000833 8.4e-15 83.6 95 46.3
PSO210G7657 Papaver somniferum HOM05D000329 ORTHO05D000833 1.1e-14 83.2 95 46.3
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 3.0e-12 75.1 93 43.0
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 3.9e-12 74.7 57 57.9
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 6.6e-12 73.9 58 60.3
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 6.6e-12 73.9 57 59.6
GSVIVG01019761001 Vitis vinifera HOM05D000329 ORTHO05D000833 8.7e-12 73.6 57 59.6
AUR62017213 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.1e-11 73.2 57 52.6
Sed0005725 Sechium edule HOM05D000329 ORTHO05D000833 1.1e-11 73.2 57 54.4
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 1.5e-11 72.8 57 54.4
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 2.5e-11 72.0 57 57.9
Manes.01G061050 Manihot esculenta HOM05D000329 ORTHO05D000833 2.5e-11 72.0 58 53.4
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 2.5e-11 72.0 59 57.6
Ah.12g057000 Amaranthus hybridus HOM05D000329 ORTHO05D000833 3.3e-11 71.6 58 55.2
ClCG01G002770 Citrullus lanatus HOM05D000329 ORTHO05D000833 3.3e-11 71.6 94 40.4
Haze_08848 Corylus avellana HOM05D000329 ORTHO05D000833 5.6e-11 70.9 58 56.9
Cpa.g.sc74.31 Carica papaya HOM05D000329 ORTHO05D000833 7.3e-11 70.5 54 55.6
CsaV3_5G002860 Cucumis sativus L. HOM05D000329 ORTHO05D000833 7.3e-11 70.5 94 41.5
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 7.3e-11 70.5 95 41.1
Hund14803 Selenicereus undatus HOM05D000329 ORTHO05D000833 9.6e-11 70.1 58 53.4
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 1.3e-10 69.7 58 53.4
AUR62010670 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.3e-10 69.7 58 48.3
RcHm_v2.0_Chr7g0197841 Rosa chinensis HOM05D000329 ORTHO05D000833 1.3e-10 69.7 54 59.3
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 1.6e-10 69.3 94 40.4
Glyma.11G023700 Glycine max HOM05D000329 ORTHO05D000833 1.6e-10 69.3 68 48.5
Lsat_1_v5_gn_3_7360 Lactuca sativa HOM05D000329 ORTHO05D000833 2.1e-10 68.9 58 51.7
FAN18G0976 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.6e-10 68.2 58 53.4
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 4.8e-10 67.8 57 54.4
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 4.8e-10 67.8 59 52.5
Cfa012174 Carpinus fangiana HOM05D000329 ORTHO05D000833 6.2e-10 67.4 57 57.9
ECA246G1250 Erigeron canadensis HOM05D000329 ORTHO05D000833 8.1e-10 67.0 57 52.6
Prupe.5G099000 Prunus persica HOM05D000329 ORTHO05D000833 8.1e-10 67.0 58 55.2
FvH4_5g02310 Fragaria vesca HOM05D000329 ORTHO05D000833 1.1e-09 66.6 58 51.7
HanXRQChr17g0533711 Helianthus annuus HOM05D000329 ORTHO05D000833 1.8e-09 65.9 58 48.3
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 4.0e-09 64.7 57 49.1
FAN08G1575 Fragaria x ananassa HOM05D000329 ORTHO05D000833 4.0e-09 64.7 56 53.6
Lj2A191G51 Lonicera japonica HOM05D000329 ORTHO05D000833 4.0e-09 64.7 56 53.6
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 4.0e-09 64.7 57 49.1
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 4.0e-09 64.7 58 50.0
Phvul.002G157500 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 6.9e-09 63.9 57 49.1
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 6.9e-09 63.9 60 48.3
Actinidia14555 Actinidia chinensis HOM05D000329 ORTHO05D000833 9.0e-09 63.5 58 48.3
FAN13G2110 Fragaria x ananassa HOM05D000329 ORTHO05D000833 9.0e-09 63.5 56 53.6
LjContig00312_ERROPOS870357g0009147 Lotus japonicus HOM05D000329 ORTHO05D000833 9.0e-09 63.5 57 49.1
Oeu009171.4 Olea europaea HOM05D000329 ORTHO05D000833 9.0e-09 63.5 58 46.6
Peaxi162Scf00119g00838 Petunia axillaris HOM05D000329 ORTHO05D000833 9.0e-09 63.5 59 49.2
Sc01g0009540 Simmondsia chinensis HOM05D000329 ORTHO05D000833 9.0e-09 63.5 59 44.1
Solyc08g081000.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 9.0e-09 63.5 58 50.0
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 1.2e-08 63.2 58 46.6
Sopen08g029320 Solanum pennellii HOM05D000329 ORTHO05D000833 1.2e-08 63.2 58 50.0
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 1.2e-08 63.2 58 44.8
Ca_24553_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 1.5e-08 62.8 57 47.4
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 1.5e-08 62.8 58 43.1
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 1.5e-08 62.8 57 56.1
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 2.0e-08 62.4 58 43.1
Glyma.01G219800 Glycine max HOM05D000329 ORTHO05D000833 2.0e-08 62.4 67 43.3
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 2.6e-08 62.0 58 48.3
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 3.4e-08 61.6 58 43.1
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 4.4e-08 61.2 58 50.0
FAN04G0379 Fragaria x ananassa HOM05D000329 ORTHO05D000833 4.4e-08 61.2 56 51.8
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 5.8e-08 60.8 58 43.1
AL2G11730 Arabidopsis lyrata HOM05D000329 ORTHO05D000833 7.6e-08 60.5 58 39.7
Medtr5g010300 Medicago truncatula HOM05D000329 ORTHO05D000833 7.6e-08 60.5 57 45.6
TPR.G6625 Trifolium pratense HOM05D000329 ORTHO05D000833 7.6e-08 60.5 57 43.9
AT1G63490 Arabidopsis thaliana HOM05D000329 ORTHO05D000833 9.9e-08 60.1 58 39.7
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 1.3e-07 59.7 57 45.6
Gohir.D08G200900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.7e-07 59.3 58 41.4
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 1.7e-07 59.3 58 41.4
Thhalv10023217m.g Eutrema salsugineum HOM05D000329 ORTHO05D000833 2.2e-07 58.9 58 39.7
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 2.9e-07 58.5 54 48.1
SGA_v2.0_scaffold144G35947 Striga asiatica HOM05D000329 ORTHO05D000833 4.9e-07 57.8 60 41.7
VMungo1215G1167 Vigna mungo HOM05D000329 ORTHO05D000833 6.4e-07 57.4 57 43.9
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 1.1e-06 56.6 58 41.4
A09p13680 Brassica napus HOM05D000329 ORTHO05D000833 1.4e-06 56.2 59 40.7
BraA09t37021Z Brassica rapa HOM05D000329 ORTHO05D000833 1.4e-06 56.2 59 40.7
ATR0680G104 Amborella trichopoda HOM05D000329 ORTHO05D000833 1.9e-06 55.8 93 36.6
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 1.9e-06 55.8 58 44.8
Aa31LG2G810 Aethionema arabicum HOM05D000329 ORTHO05D000833 3.2e-06 55.1 57 38.6
Psat2g182320 Pisum sativum HOM05D000329 ORTHO05D000833 3.2e-06 55.1 57 42.1
THA.LOC104818027 Tarenaya hassleriana HOM05D000329 ORTHO05D000833 3.2e-06 55.1 58 39.7
DCAR_006743 Daucus carota HOM05D000329 ORTHO05D000833 4.2e-06 54.7 57 43.9
C09p16350 Brassica napus HOM05D000329 ORTHO05D000833 5.4e-06 54.3 59 39.0
BolC9t54546H Brassica oleracea HOM05D000329 ORTHO05D000833 5.4e-06 54.3 59 39.0
CARHR047880 Cardamine hirsuta HOM05D000329 ORTHO05D000833 5.4e-06 54.3 57 36.8
arahy.Tifrunner.gnm1.ann1.6V6FMV Arachis hypogaea HOM05D000329 ORTHO05D000833 7.1e-06 53.9 57 42.1


User provided reference genes

Program Settings