Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 1.8e-261 905.6 538 100.0
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 2.3e-232 808.9 538 90.7
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 1.3e-230 803.1 504 95.6
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 5.4e-229 797.7 536 89.6
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 7.0e-229 797.3 536 89.4
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 1.2e-228 796.6 538 90.5
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.7e-227 792.7 536 88.6
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 2.3e-227 792.3 524 82.4
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 1.1e-226 790.0 538 90.0
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 2.5e-226 788.9 536 84.0
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.1e-225 785.8 538 88.8
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 2.3e-224 782.3 536 88.1
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 4.0e-224 781.6 536 88.8
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 4.0e-224 781.6 504 92.9
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 4.0e-224 781.6 538 87.7
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 5.2e-224 781.2 514 90.1
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 8.9e-224 780.4 538 87.9
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 1.5e-223 779.6 536 88.6
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 2.6e-223 778.9 536 87.5
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 3.4e-223 778.5 536 88.4
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 4.4e-223 778.1 536 88.4
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 4.4e-223 778.1 536 88.6
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 7.5e-223 777.3 536 82.5
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 9.8e-223 776.9 536 86.8
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 1.3e-222 776.5 504 90.9
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 2.2e-222 775.8 536 88.1
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 2.2e-222 775.8 538 85.7
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 2.9e-222 775.4 512 90.2
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.7e-222 775.0 536 87.1
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 6.4e-222 774.2 514 89.3
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 8.3e-222 773.9 538 85.5
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.4e-221 773.1 536 86.4
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.4e-221 773.1 536 87.1
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.4e-221 772.3 504 90.5
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 2.4e-221 772.3 538 85.3
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 4.1e-221 771.5 536 87.7
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 9.2e-221 770.4 514 88.5
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 1.6e-220 769.6 504 92.3
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 2.0e-220 769.2 514 89.5
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 2.7e-220 768.8 504 85.7
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 2.7e-220 768.8 536 82.5
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 3.5e-220 768.5 536 86.2
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.0e-219 766.9 502 87.6
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 1.7e-219 766.1 512 89.3
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 1.7e-219 766.1 502 87.1
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 2.3e-219 765.8 512 89.3
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 5.0e-219 764.6 504 86.1
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 6.6e-219 764.2 502 90.2
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 6.6e-219 764.2 516 87.2
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 8.6e-219 763.8 536 86.9
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 1.1e-218 763.5 536 85.1
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 1.9e-218 762.7 502 86.3
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 1.9e-218 762.7 537 85.8
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 4.3e-218 761.5 504 91.1
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 3.6e-217 758.4 502 89.8
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 4.7e-217 758.1 536 87.5
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 6.2e-217 757.7 536 84.9
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 8.0e-217 757.3 536 85.6
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.4e-216 756.5 504 90.9
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 3.1e-216 755.4 536 85.3
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 4.0e-216 755.0 512 87.5
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 6.8e-216 754.2 536 81.7
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 3.7e-214 748.4 504 91.3
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 4.9e-214 748.0 512 88.3
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 2.4e-213 745.7 504 89.1
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 3.2e-213 745.3 536 85.1
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 4.1e-213 745.0 536 84.9
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 7.0e-213 744.2 524 85.7
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 1.6e-212 743.0 512 82.4
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 2.7e-212 742.3 514 87.4
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 2.7e-212 742.3 500 87.0
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 6.0e-212 741.1 527 81.6
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 7.8e-212 740.7 536 80.4
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 1.3e-211 740.0 536 85.3
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 3.9e-211 738.4 512 81.2
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 8.6e-211 737.3 536 85.8
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 1.9e-210 736.1 503 82.7
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 1.9e-210 736.1 516 86.0
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 7.3e-210 734.2 512 85.7
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 2.8e-209 732.3 512 83.8
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 3.6e-209 731.9 512 81.2
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 6.2e-209 731.1 510 85.7
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 6.2e-209 731.1 510 85.7
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 8.1e-209 730.7 536 79.1
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 8.1e-209 730.7 536 79.1
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 1.4e-208 729.9 512 85.4
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-208 729.9 485 89.5
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.2e-207 726.9 536 82.3
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.3e-206 723.4 534 84.5
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 1.9e-205 719.5 520 84.0
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.2e-205 717.2 564 75.4
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.6e-204 716.5 536 74.1
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.6e-201 705.3 536 77.6
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 4.7e-201 704.9 512 85.2
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 8.9e-200 700.7 536 73.1
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 4.4e-199 698.4 576 70.5
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 5.8e-199 698.0 536 77.8
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 7.6e-199 697.6 536 79.7
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 2.2e-198 696.0 579 75.3
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.9e-197 693.0 557 77.7
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 3.2e-197 692.2 484 86.4
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 8.1e-193 677.6 536 77.8
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 6.9e-192 674.5 486 87.7
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 3.8e-190 668.7 515 81.6
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 1.1e-189 667.2 512 73.2
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 1.2e-188 663.7 490 85.5
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.0e-187 659.1 538 79.4
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 3.8e-182 642.1 435 87.6
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 5.1e-179 631.7 428 90.2
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 2.8e-177 625.9 430 90.2
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 5.9e-159 565.1 414 86.0
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 2.7e-156 556.2 519 67.6
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 4.1e-152 542.3 503 69.0
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 1.3e-137 494.2 291 85.2
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 9.1e-128 461.5 276 85.1
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 5.0e-126 455.7 322 84.2
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 1.5e-117 427.6 331 75.2
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 4.1e-112 409.5 407 58.2
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 1.1e-101 374.8 232 84.9
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 2.5e-101 373.6 232 84.5
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 3.3e-93 346.7 365 74.2
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.9e-80 304.3 257 82.1
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 3.2e-72 276.9 176 88.6
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 9.3e-72 275.4 511 48.7
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 5.6e-61 239.6 512 35.5
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 4.0e-59 233.4 156 81.4
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 2.3e-46 191.0 99 86.9
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.9e-45 188.0 150 65.3
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 9.4e-40 169.1 318 42.5
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 1.1e-37 162.2 80 92.5
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 1.1e-32 145.6 129 63.6
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 4.2e-32 143.7 137 61.3
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.1e-29 135.6 299 31.1
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.6e-29 134.4 119 64.7
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 1.7e-28 131.7 170 49.4
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 5.3e-27 126.7 73 84.9
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.7e-25 121.7 76 78.9
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 4.2e-24 117.1 64 84.4
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 4.2e-24 117.1 64 84.4
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 1.3e-20 105.5 51 92.2
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 1.7e-20 105.1 56 82.1
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 1.4e-19 102.1 56 78.6
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 5.0e-17 93.6 45 88.9
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.5e-16 91.3 48 93.8
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 9.4e-16 89.4 45 84.4
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 8.0e-15 86.3 127 40.9
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 2.3e-14 84.7 69 59.4
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 2.3e-14 84.7 69 59.4
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 1.1e-11 75.9 105 42.9
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 5.4e-11 73.6 134 71.6
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 5.9e-10 70.1 36 83.3
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 6.5e-09 66.6 61 62.3
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 6.1e-07 60.1 37 70.3
TPR.G36494 Trifolium pratense HOM05D009291 ORTHO05D010716 1.0e-06 59.3 29 82.8
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 8.8e-06 56.2 74 50.0


User provided reference genes

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