Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0043900 Salix brachista HOM05D005387 ORTHO05D006711 6.3e-111 404.1 196 100.0
Potri.002G054000 Populus trichocarpa HOM05D005387 ORTHO05D006711 1.3e-63 246.9 129 96.1
Manes.05G075500 Manihot esculenta HOM05D005387 ORTHO05D006711 2.1e-61 239.6 129 92.2
ClCG09G006960 Citrullus lanatus HOM05D005387 ORTHO05D006711 2.7e-61 239.2 129 92.2
Sed0006598 Sechium edule HOM05D005387 ORTHO05D006711 2.7e-61 239.2 129 92.2
CANSAT25G2972 Cannabis sativa HOM05D005387 ORTHO05D006711 6.0e-61 238.0 129 92.2
CsaV3_7G028200 Cucumis sativus L. HOM05D005387 ORTHO05D006711 6.0e-61 238.0 129 91.5
Lj2A1174G27 Lonicera japonica HOM05D005387 ORTHO05D006711 6.0e-61 238.0 129 91.5
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.0e-60 237.3 129 89.9
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.0e-60 237.3 129 89.9
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.0e-60 237.3 129 89.9
BolC8t46846H Brassica oleracea HOM05D005387 ORTHO05D006711 1.0e-60 237.3 129 89.9
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.0e-60 237.3 129 89.9
MELO3C015844.2 Cucumis melo HOM05D005387 ORTHO05D006711 1.3e-60 236.9 129 90.7
Cfa006132 Carpinus fangiana HOM05D005387 ORTHO05D006711 1.7e-60 236.5 129 91.5
Haze_04719 Corylus avellana HOM05D005387 ORTHO05D006711 1.7e-60 236.5 129 91.5
CSS0042122 Camellia sinensis var. sinensis HOM05D005387 ORTHO05D006711 2.3e-60 236.1 129 90.7
TAR362G0175 Trochodendron aralioides HOM05D005387 ORTHO05D006711 2.3e-60 236.1 129 91.5
Eucgr.K03375 Eucalyptus grandis HOM05D005387 ORTHO05D006711 3.0e-60 235.7 129 90.7
Glyma.16G167800 Glycine max HOM05D005387 ORTHO05D006711 3.0e-60 235.7 129 90.7
Aa31LG1G9340 Aethionema arabicum HOM05D005387 ORTHO05D006711 6.6e-60 234.6 126 92.1
Aqoxy5G00512 Aquilegia oxysepala HOM05D005387 ORTHO05D006711 6.6e-60 234.6 129 90.7
Carub.0001s0233 Capsella rubella HOM05D005387 ORTHO05D006711 6.6e-60 234.6 129 89.1
Thhalv10006888m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 6.6e-60 234.6 129 89.1
MBI18_g32210_MAGBIO Magnolia biondii HOM05D005387 ORTHO05D006711 8.6e-60 234.2 125 93.6
Sp1g02210 Schrenkiella parvula HOM05D005387 ORTHO05D006711 8.6e-60 234.2 129 89.1
VMungo0464G1141 Vigna mungo HOM05D005387 ORTHO05D006711 1.1e-59 233.8 129 89.1
QL12p022031 Quercus lobata HOM05D005387 ORTHO05D006711 1.5e-59 233.4 128 90.6
Oeu015966.1 Olea europaea HOM05D005387 ORTHO05D006711 1.9e-59 233.0 129 90.7
EL10Ac6g13926 Beta vulgaris HOM05D005387 ORTHO05D006711 2.5e-59 232.6 129 88.4
Ciclev10018975m.g Citrus clementina HOM05D005387 ORTHO05D006711 2.5e-59 232.6 130 90.8
Lj2g0021203 Lotus japonicus HOM05D005387 ORTHO05D006711 2.5e-59 232.6 130 90.8
Phvul.004G095600 Phaseolus vulgaris HOM05D005387 ORTHO05D006711 2.5e-59 232.6 129 89.1
AUR62044240 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.3e-59 232.3 129 88.4
TWI23G0758 Tripterygium wilfordii HOM05D005387 ORTHO05D006711 3.3e-59 232.3 122 92.6
CiPaw.07G092300 Carya illinoinensis HOM05D005387 ORTHO05D006711 4.3e-59 231.9 129 89.1
Glyma.02G082200 Glycine max HOM05D005387 ORTHO05D006711 4.3e-59 231.9 129 88.4
GSVIVG01011125001 Vitis vinifera HOM05D005387 ORTHO05D006711 4.3e-59 231.9 129 89.9
AUR62034034 Chenopodium quinoa HOM05D005387 ORTHO05D006711 5.6e-59 231.5 128 88.3
AUR62044203 Chenopodium quinoa HOM05D005387 ORTHO05D006711 5.6e-59 231.5 128 88.3
Cc01_g19560 Coffea canephora HOM05D005387 ORTHO05D006711 5.6e-59 231.5 125 92.8
Thecc.01G280400 Theobroma cacao HOM05D005387 ORTHO05D006711 5.6e-59 231.5 129 89.9
Migut.D00288 Erythranthe guttata HOM05D005387 ORTHO05D006711 9.5e-59 230.7 123 93.5
vmacro02566 Vaccinium macrocarpon HOM05D005387 ORTHO05D006711 9.5e-59 230.7 125 91.2
AL1G12680 Arabidopsis lyrata HOM05D005387 ORTHO05D006711 1.2e-58 230.3 129 87.6
AT1G03190 Arabidopsis thaliana HOM05D005387 ORTHO05D006711 1.2e-58 230.3 129 87.6
Medtr2g084735 Medicago truncatula HOM05D005387 ORTHO05D006711 1.2e-58 230.3 131 89.3
Rhsim13G0024300 Rhododendron simsii HOM05D005387 ORTHO05D006711 1.6e-58 229.9 125 91.2
SHI14548 Sapria himalayana HOM05D005387 ORTHO05D006711 1.6e-58 229.9 125 92.8
Dinv34746 Davidia involucrata HOM05D005387 ORTHO05D006711 2.1e-58 229.6 129 88.4
PGR044G0219 Punica granatum HOM05D005387 ORTHO05D006711 2.1e-58 229.6 129 88.4
Gohir.A11G122400 Gossypium hirsutum HOM05D005387 ORTHO05D006711 2.8e-58 229.2 129 87.6
Gohir.D11G127700 Gossypium hirsutum HOM05D005387 ORTHO05D006711 2.8e-58 229.2 129 87.6
Gorai.007G136500 Gossypium raimondii HOM05D005387 ORTHO05D006711 2.8e-58 229.2 129 87.6
THA.LOC104825999 Tarenaya hassleriana HOM05D005387 ORTHO05D006711 3.6e-58 228.8 130 88.5
AUR62025819 Chenopodium quinoa HOM05D005387 ORTHO05D006711 4.7e-58 228.4 131 87.8
MD03G1266200 Malus domestica HOM05D005387 ORTHO05D006711 4.7e-58 228.4 122 95.1
Nn4g26234 Nelumbo nucifera HOM05D005387 ORTHO05D006711 4.7e-58 228.4 127 89.0
PSO210G3721 Papaver somniferum HOM05D005387 ORTHO05D006711 4.7e-58 228.4 118 94.9
PSO832G0722 Papaver somniferum HOM05D005387 ORTHO05D006711 8.1e-58 227.6 118 94.9
TPR.G36709 Trifolium pratense HOM05D005387 ORTHO05D006711 8.1e-58 227.6 130 88.5
CDE06G0365 Ceratophyllum demersum HOM05D005387 ORTHO05D006711 1.1e-57 227.3 125 90.4
HanXRQChr10g0282751 Helianthus annuus HOM05D005387 ORTHO05D006711 1.1e-57 227.3 120 94.2
Hund03003 Selenicereus undatus HOM05D005387 ORTHO05D006711 1.1e-57 227.3 125 88.8
Gohir.A08G068200 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.4e-57 226.9 129 87.6
RcHm_v2.0_Chr6g0291151 Rosa chinensis HOM05D005387 ORTHO05D006711 1.4e-57 226.9 130 88.5
Actinidia09142 Actinidia chinensis HOM05D005387 ORTHO05D006711 1.8e-57 226.5 125 88.8
Ca_24177_v3 Cicer arietinum L. HOM05D002851 ORTHO05D003084 1.8e-57 226.5 118 94.1
Gorai.004G081200 Gossypium raimondii HOM05D005387 ORTHO05D006711 1.8e-57 226.5 129 87.6
SalBow4G1053 Salvia bowleyana HOM05D005387 ORTHO05D006711 1.8e-57 226.5 118 94.1
Duzib211G0289 Durio zibethinus HOM05D005387 ORTHO05D006711 2.4e-57 226.1 129 87.6
Gohir.D08G076600 Gossypium hirsutum HOM05D005387 ORTHO05D006711 2.4e-57 226.1 129 86.8
FvH4_2g23690 Fragaria vesca HOM05D005387 ORTHO05D006711 4.0e-57 225.3 128 88.3
FAN24G0367 Fragaria x ananassa HOM05D005387 ORTHO05D006711 4.0e-57 225.3 128 88.3
Zm00001eb417930 Zea mays HOM05D005387 ORTHO05D006711 4.0e-57 225.3 123 89.4
ATR0626G059 Amborella trichopoda HOM05D005387 ORTHO05D006711 6.8e-57 224.6 120 93.3
AUR62044301 Chenopodium quinoa HOM05D005387 ORTHO05D006711 6.8e-57 224.6 129 86.0
DCAR_002738 Daucus carota HOM05D005387 ORTHO05D006711 6.8e-57 224.6 129 87.6
FAN15G0991 Fragaria x ananassa HOM05D005387 ORTHO05D006711 8.9e-57 224.2 130 86.9
Lalb_Chr01g0009611 Lupinus albus HOM05D005387 ORTHO05D006711 1.2e-56 223.8 125 88.8
Nitab4.5_0006390g0070 Nicotiana tabacum HOM05D005387 ORTHO05D006711 1.2e-56 223.8 118 93.2
Os05g0144800 Oryza sativa ssp. japonica HOM05D005387 ORTHO05D006711 1.2e-56 223.8 118 92.4
Solyc06g008970.4 Solanum lycopersicum HOM05D005387 ORTHO05D006711 1.2e-56 223.8 118 93.2
Sopen06g003750 Solanum pennellii HOM05D005387 ORTHO05D006711 1.2e-56 223.8 118 93.2
arahy.Tifrunner.gnm1.ann1.48M1R9 Arachis hypogaea HOM05D005387 ORTHO05D006711 1.5e-56 223.4 130 87.7
arahy.Tifrunner.gnm1.ann1.4E1RNV Arachis hypogaea HOM05D005387 ORTHO05D006711 1.5e-56 223.4 130 87.7
HPP92_023768 Vanilla planifolia HOM05D005387 ORTHO05D006711 1.5e-56 223.4 117 94.0
Hma1.2p1_0257F.1_g103540 Hydrangea macrophylla HOM05D005387 ORTHO05D006711 2.0e-56 223.0 122 91.0
Psat1g104680 Pisum sativum HOM05D005387 ORTHO05D006711 2.6e-56 222.6 130 86.9
CAN.G1006.14 Capsicum annuum HOM05D005387 ORTHO05D006711 5.8e-56 221.5 118 92.4
ECA247G0058 Erigeron canadensis HOM05D005387 ORTHO05D006711 5.8e-56 221.5 118 91.5
MD11G1286800 Malus domestica HOM05D005387 ORTHO05D006711 7.1e-54 214.5 116 93.1
Mapoly0059s0089 Marchantia polymorpha HOM05D005387 ORTHO05D006711 3.5e-53 212.2 119 87.4
Pp3c10_16570 Physcomitrium patens HOM05D005387 ORTHO05D006711 7.8e-53 211.1 119 86.6
AUR62007973 Chenopodium quinoa HOM05D005387 ORTHO05D006711 6.6e-52 208.0 137 77.4
Peaxi162Scf00161g01216 Petunia axillaris HOM05D005387 ORTHO05D006711 8.1e-50 201.1 103 94.2
CBR_g47089 Chara braunii HOM05D005387 ORTHO05D006711 1.3e-47 193.7 117 82.1
AagrBONN_evm.TU.Sc2ySwM_228.154 Anthoceros agrestis HOM05D005387 ORTHO05D006711 3.8e-47 192.2 119 80.7
Cre17.g706300 Chlamydomonas reinhardtii HOM05D005387 ORTHO05D006711 8.7e-44 181.0 125 72.8
Atru.chr5.1425 Acer truncatum HOM05D005387 ORTHO05D006711 1.1e-43 180.6 89 98.9
SMO118G0087 Selaginella moellendorffii HOM05D005387 ORTHO05D006711 6.2e-42 174.9 134 71.6
MCO11G848 Micromonas commoda HOM05D005387 ORTHO05D006711 4.0e-41 172.2 118 71.2
PRCOL_00002595 Prasinoderma coloniale HOM05D005387 ORTHO05D006711 6.9e-41 171.4 119 70.6
BolC8t52806H Brassica oleracea HOM05D005387 ORTHO05D006711 3.5e-37 159.1 125 66.4
Haze_26829 Corylus avellana HOM05D005387 ORTHO05D006711 4.5e-32 142.1 100 66.0
C08p52900 Brassica napus HOM05D005387 ORTHO05D006711 3.3e-27 125.9 124 57.3
Thhalv10011297m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 5.6e-27 125.2 64 95.3
unitig_0.g111 Utricularia gibba HOM05D005387 ORTHO05D006711 5.6e-27 125.2 97 64.9
AUR62017677 Chenopodium quinoa HOM05D005387 ORTHO05D006711 1.3e-26 124.0 66 87.9
Cpa.g.sc52.27 Carica papaya HOM05D005387 ORTHO05D006711 7.1e-22 108.2 56 94.6
Prupe.8G242000 Prunus persica HOM05D005387 ORTHO05D006711 9.3e-22 107.8 54 96.3
SGA_v2.0_scaffold1G00463 Striga asiatica HOM05D005387 ORTHO05D006711 2.7e-21 106.3 53 98.1
Nitab4.5_0000295g0200 Nicotiana tabacum HOM05D005387 ORTHO05D006711 6.0e-21 105.1 56 92.9
HPP92_026404 Vanilla planifolia HOM05D005387 ORTHO05D006711 5.7e-11 72.0 35 97.1
SGA_v2.0_scaffold304G47926 Striga asiatica HOM05D005387 ORTHO05D006711 5.3e-09 65.5 60 63.3
HPP92_026405 Vanilla planifolia HOM05D005387 ORTHO05D006711 1.2e-08 64.3 36 86.1
COL.COLO4_09106 Corchorus olitorius HOM05D005387 ORTHO05D006711 2.5e-06 56.6 36 77.8
SHI33552 Sapria himalayana HOM05D005387 ORTHO05D006711 4.2e-06 55.8 37 78.4
ClCG09G002140 Citrullus lanatus HOM05D001537 ORTHO05D002595 9.4e-06 54.7 63 42.9


User provided reference genes

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