Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO167G0077 Selaginella moellendorffii HOM05D002182 ORTHO05D008382 3.3e-247 857.8 409 100.0
SMO347G0440 Selaginella moellendorffii HOM05D002182 ORTHO05D008382 4.6e-31 139.8 242 40.5
SEGI_13382 Sequoiadendron giganteum HOM05D002182 ORTHO05D008382 2.3e-14 84.3 80 48.8
Pp3c8_22620 Physcomitrium patens HOM05D002182 ORTHO05D008382 1.7e-12 78.2 80 46.2
THA.LOC104800954 Tarenaya hassleriana HOM05D002182 ORTHO05D008382 2.2e-12 77.8 80 45.0
Mapoly0014s0219 Marchantia polymorpha HOM05D002182 ORTHO05D008382 3.7e-12 77.0 80 47.5
PSO063G4176 Papaver somniferum HOM05D002182 ORTHO05D008382 3.7e-12 77.0 103 40.8
TAR365G1258 Trochodendron aralioides HOM05D002182 ORTHO05D008382 1.4e-11 75.1 103 38.8
BcaC01g05921 Brassica carinata HOM05D002182 ORTHO05D008382 2.4e-11 74.3 80 43.8
MBI07_g19432_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D008382 2.4e-11 74.3 103 40.8
A03p18020 Brassica napus HOM05D002182 ORTHO05D008382 3.1e-11 73.9 80 43.8
C03p21060 Brassica napus HOM05D002182 ORTHO05D008382 3.1e-11 73.9 80 43.8
BraA03t11062Z Brassica rapa HOM05D002182 ORTHO05D008382 3.1e-11 73.9 80 43.8
ClCG05G007130 Citrullus lanatus HOM05D002182 ORTHO05D008382 3.1e-11 73.9 103 36.9
MELO3C006788.2 Cucumis melo HOM05D002182 ORTHO05D008382 3.1e-11 73.9 103 36.9
Haze_11692 Corylus avellana HOM05D002182 ORTHO05D008382 4.1e-11 73.6 103 37.9
ATR0686G228 Amborella trichopoda HOM05D002182 ORTHO05D008382 5.3e-11 73.2 80 42.5
Nn1g08084 Nelumbo nucifera HOM05D002182 ORTHO05D008382 5.3e-11 73.2 103 39.8
AagrBONN_evm.TU.Sc2ySwM_228.2256 Anthoceros agrestis HOM05D002182 ORTHO05D008382 6.9e-11 72.8 80 41.2
CsaV3_3G015890 Cucumis sativus L. HOM05D002182 ORTHO05D008382 6.9e-11 72.8 103 36.9
CARHR125770 Cardamine hirsuta HOM05D002182 ORTHO05D008382 9.1e-11 72.4 80 43.8
PGR142G0868 Punica granatum HOM05D002182 ORTHO05D008382 9.1e-11 72.4 80 42.5
GSVIVG01031636001 Vitis vinifera HOM05D002182 ORTHO05D008382 9.1e-11 72.4 103 36.9
Atru.chr3.1773 Acer truncatum HOM05D002182 ORTHO05D008382 1.2e-10 72.0 103 37.9
BcaB01g03999 Brassica carinata HOM05D002182 ORTHO05D008382 1.2e-10 72.0 80 42.5
Thhalv10016222m.g Eutrema salsugineum HOM05D002182 ORTHO05D008382 1.2e-10 72.0 107 37.4
Lalb_Chr23g0278251 Lupinus albus HOM05D002182 ORTHO05D008382 1.5e-10 71.6 103 36.9
Cpa.g.sc157.4 Carica papaya HOM05D002182 ORTHO05D008382 2.0e-10 71.2 103 37.9
Cre17.g725100 Chlamydomonas reinhardtii HOM05D002182 ORTHO05D008382 2.0e-10 71.2 79 44.3
Glyma.11G253100 Glycine max HOM05D002182 ORTHO05D008382 2.0e-10 71.2 103 35.9
CiPaw.01G112100 Carya illinoinensis HOM05D002182 ORTHO05D008382 2.6e-10 70.9 103 36.9
SalBow3G0147 Salvia bowleyana HOM05D002182 ORTHO05D008382 2.6e-10 70.9 103 37.9
Zm00001eb317420 Zea mays HOM05D002182 ORTHO05D008382 2.6e-10 70.9 103 38.8
arahy.Tifrunner.gnm1.ann1.93YPU9 Arachis hypogaea HOM05D002182 ORTHO05D008382 4.5e-10 70.1 103 35.9
Carub.0004s1334 Capsella rubella HOM05D002182 ORTHO05D008382 4.5e-10 70.1 80 41.2
Eucgr.L00646 Eucalyptus grandis HOM05D002182 ORTHO05D008382 4.5e-10 70.1 80 41.2
Gohir.D10G135200 Gossypium hirsutum HOM05D002182 ORTHO05D008382 4.5e-10 70.1 103 37.9
Gorai.011G150100 Gossypium raimondii HOM05D002182 ORTHO05D008382 4.5e-10 70.1 103 37.9
VMungo1383G0373 Vigna mungo HOM05D002182 ORTHO05D008382 4.5e-10 70.1 103 35.9
Migut.N00431 Erythranthe guttata HOM05D002182 ORTHO05D008382 5.9e-10 69.7 103 37.9
Thecc.04G190100 Theobroma cacao HOM05D002182 ORTHO05D008382 5.9e-10 69.7 103 37.9
AT2G32000 Arabidopsis thaliana HOM05D002182 ORTHO05D008382 7.7e-10 69.3 80 41.2
MSTRG.420 Avicennia marina HOM05D002182 ORTHO05D008382 7.7e-10 69.3 103 38.8
CSS0003059 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D008382 7.7e-10 69.3 103 35.0
CDE05G0942 Ceratophyllum demersum HOM05D002182 ORTHO05D008382 7.7e-10 69.3 241 26.1
Sed0005840 Sechium edule HOM05D002182 ORTHO05D008382 7.7e-10 69.3 103 35.0
Manes.01G002901 Manihot esculenta HOM05D002182 ORTHO05D008382 1.0e-09 68.9 103 35.9
Sabra14G0112200 Salix brachista HOM05D002182 ORTHO05D008382 1.0e-09 68.9 158 30.4
Sp4g14400 Schrenkiella parvula HOM05D002182 ORTHO05D008382 1.0e-09 68.9 80 40.0
COL.COLO4_35972 Corchorus olitorius HOM05D002182 ORTHO05D008382 1.3e-09 68.6 78 42.3
Os09g0500600 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D008382 1.3e-09 68.6 103 38.8
FAN17G1163 Fragaria x ananassa HOM05D002182 ORTHO05D008382 1.7e-09 68.2 80 38.8
Gohir.A10G131800 Gossypium hirsutum HOM05D002182 ORTHO05D008382 1.7e-09 68.2 103 36.9
Oeu034295.1 Olea europaea HOM05D002182 ORTHO05D008382 1.7e-09 68.2 103 36.9
Phvul.001G264300 Phaseolus vulgaris HOM05D002182 ORTHO05D008382 1.7e-09 68.2 103 35.0
arahy.Tifrunner.gnm1.ann1.RWIY1E Arachis hypogaea HOM05D002182 ORTHO05D008382 2.2e-09 67.8 103 35.0
CANSAT78G1786 Cannabis sativa HOM05D002182 ORTHO05D008382 2.2e-09 67.8 103 36.9
Duzib212G0342 Durio zibethinus HOM05D002182 ORTHO05D008382 2.2e-09 67.8 103 36.9
RcHm_v2.0_Chr4g0412031 Rosa chinensis HOM05D002182 ORTHO05D008382 2.2e-09 67.8 80 37.5
Aa31LG5G5010 Aethionema arabicum HOM05D002182 ORTHO05D008382 2.9e-09 67.4 107 35.5
Ca_16436_v3 Cicer arietinum L. HOM05D002182 ORTHO05D008382 2.9e-09 67.4 103 34.0
Potri.014G148800 Populus trichocarpa HOM05D002182 ORTHO05D008382 2.9e-09 67.4 103 37.9
Aqoxy2G03986 Aquilegia oxysepala HOM05D002182 ORTHO05D008382 3.8e-09 67.0 103 36.9
AL4G27360 Arabidopsis lyrata HOM05D002182 ORTHO05D008382 3.8e-09 67.0 80 40.0
HanXRQChr14g0436751 Helianthus annuus HOM05D002182 ORTHO05D008382 3.8e-09 67.0 103 35.0
Dinv32179 Davidia involucrata HOM05D002182 ORTHO05D008382 5.0e-09 66.6 103 33.0
FvH4_4g12750 Fragaria vesca HOM05D002182 ORTHO05D008382 5.0e-09 66.6 80 37.5
FAN12G0184 Fragaria x ananassa HOM05D002182 ORTHO05D008382 5.0e-09 66.6 80 37.5
FAN22G0833 Fragaria x ananassa HOM05D002182 ORTHO05D008382 5.0e-09 66.6 80 37.5
Lsat_1_v5_gn_2_49140 Lactuca sativa HOM05D002182 ORTHO05D008382 5.0e-09 66.6 103 35.0
Prupe.1G173400 Prunus persica HOM05D002182 ORTHO05D008382 5.0e-09 66.6 103 35.0
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 6.5e-09 66.2 80 37.5
Prupe.1G173500 Prunus persica HOM05D002182 ORTHO05D008382 6.5e-09 66.2 88 36.4
Rhsim09G0063400 Rhododendron simsii HOM05D002182 ORTHO05D008382 6.5e-09 66.2 103 34.0
TPR.G18108 Trifolium pratense HOM05D002182 ORTHO05D008382 6.5e-09 66.2 80 36.2
Nitab4.5_0000309g0290 Nicotiana tabacum HOM05D002182 ORTHO05D008382 8.5e-09 65.9 80 37.5
Nitab4.5_0004869g0010 Nicotiana tabacum HOM05D002182 ORTHO05D008382 8.5e-09 65.9 80 37.5
Actinidia35818 Actinidia chinensis HOM05D002182 ORTHO05D008382 1.1e-08 65.5 103 34.0
Lj6g0009713 Lotus japonicus HOM05D002182 ORTHO05D008382 1.1e-08 65.5 80 36.2
Peaxi162Scf00286g00722 Petunia axillaris HOM05D002182 ORTHO05D008382 1.1e-08 65.5 80 37.5
MD04G1023600 Malus domestica HOM05D002182 ORTHO05D008382 1.4e-08 65.1 80 37.5
HPP92_011791 Vanilla planifolia HOM05D002182 ORTHO05D008382 1.9e-08 64.7 103 37.9
TWI63G1391 Tripterygium wilfordii HOM05D002182 ORTHO05D008382 2.5e-08 64.3 80 37.5
CBR_g21883 Chara braunii HOM05D002182 ORTHO05D008382 3.2e-08 63.9 80 35.0
ECA238G0923 Erigeron canadensis HOM05D002182 ORTHO05D008382 3.2e-08 63.9 103 33.0
CAN.G1325.5 Capsicum annuum HOM05D002182 ORTHO05D008382 4.2e-08 63.5 80 36.2
Sopen09g035820 Solanum pennellii HOM05D002182 ORTHO05D008382 4.2e-08 63.5 80 37.5
Sc19g0007480 Simmondsia chinensis HOM05D002182 ORTHO05D008382 5.5e-08 63.2 103 32.0
SGA_v2.0_scaffold128G34129 Striga asiatica HOM05D002182 ORTHO05D008382 5.5e-08 63.2 103 35.0
vmacro00427 Vaccinium macrocarpon HOM05D002182 ORTHO05D008382 9.4e-08 62.4 80 35.0
DCAR_024119 Daucus carota HOM05D002182 ORTHO05D008382 1.6e-07 61.6 80 36.2
Solyc09g097880.4 Solanum lycopersicum HOM05D002182 ORTHO05D008382 1.6e-07 61.6 78 38.5
AUR62020905 Chenopodium quinoa HOM05D002182 ORTHO05D008382 2.1e-07 61.2 80 32.5
Medtr3g084800 Medicago truncatula HOM05D002182 ORTHO05D008382 2.1e-07 61.2 80 35.0
Cc03_g09640 Coffea canephora HOM05D002182 ORTHO05D008382 2.7e-07 60.8 103 34.0
EL10Ac3g07419 Beta vulgaris HOM05D002182 ORTHO05D008382 3.6e-07 60.5 80 32.5
AUR62018514 Chenopodium quinoa HOM05D002182 ORTHO05D008382 4.7e-07 60.1 103 30.1
Hund19029 Selenicereus undatus HOM05D002182 ORTHO05D008382 1.0e-06 58.9 80 32.5


User provided reference genes

Program Settings