Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 1.2e-54 216.5 121 100.0
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 5.5e-49 197.6 116 81.9
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 5.5e-49 197.6 119 82.4
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 9.4e-49 196.8 118 80.5
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 2.7e-48 195.3 115 81.7
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 2.7e-48 195.3 115 81.7
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 2.7e-48 195.3 120 80.0
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 3.6e-48 194.9 115 81.7
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 3.6e-48 194.9 120 79.2
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 3.6e-48 194.9 121 79.3
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 3.6e-48 194.9 121 79.3
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 3.6e-48 194.9 121 79.3
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 3.6e-48 194.9 115 81.7
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 4.7e-48 194.5 120 80.0
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 6.1e-48 194.1 117 80.3
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 6.1e-48 194.1 117 80.3
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 6.1e-48 194.1 115 80.9
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 6.1e-48 194.1 115 80.9
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 6.1e-48 194.1 115 80.9
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 6.1e-48 194.1 115 80.9
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 6.1e-48 194.1 120 79.2
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 8.0e-48 193.7 115 81.7
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 1.0e-47 193.4 120 79.2
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 1.4e-47 193.0 120 78.3
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 1.4e-47 193.0 120 78.3
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 1.4e-47 193.0 115 80.0
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 1.8e-47 192.6 119 79.0
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 2.3e-47 192.2 115 80.0
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 2.3e-47 192.2 116 80.2
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 2.3e-47 192.2 116 80.2
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 2.3e-47 192.2 115 80.0
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 2.3e-47 192.2 114 81.6
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 2.3e-47 192.2 116 80.2
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 2.3e-47 192.2 114 80.7
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 3.0e-47 191.8 116 79.3
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 3.0e-47 191.8 114 80.7
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.9
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 3.0e-47 191.8 114 79.8
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.9
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 3.0e-47 191.8 115 79.1
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 79.1
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 3.0e-47 191.8 115 80.0
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 4.0e-47 191.4 114 79.8
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 4.0e-47 191.4 119 79.0
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 4.0e-47 191.4 119 79.0
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 4.0e-47 191.4 114 80.7
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 4.0e-47 191.4 115 80.0
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 4.0e-47 191.4 115 80.0
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 4.0e-47 191.4 114 82.5
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 4.0e-47 191.4 115 80.0
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 5.2e-47 191.0 115 79.1
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 5.2e-47 191.0 119 79.0
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 5.2e-47 191.0 119 79.0
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 5.2e-47 191.0 115 79.1
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 5.2e-47 191.0 117 79.5
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 5.2e-47 191.0 117 79.5
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 6.8e-47 190.7 120 77.5
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 6.8e-47 190.7 115 79.1
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 8.8e-47 190.3 118 78.0
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 8.8e-47 190.3 114 79.8
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 8.8e-47 190.3 120 78.3
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 8.8e-47 190.3 114 78.9
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 8.8e-47 190.3 115 79.1
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 1.2e-46 189.9 115 79.1
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 1.2e-46 189.9 117 79.5
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 2.6e-46 188.7 115 78.3
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 2.6e-46 188.7 119 76.5
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 2.6e-46 188.7 119 76.5
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 2.6e-46 188.7 119 76.5
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 3.4e-46 188.3 120 77.5
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 3.4e-46 188.3 115 78.3
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 3.4e-46 188.3 115 78.3
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 3.4e-46 188.3 115 78.3
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 3.4e-46 188.3 119 79.0
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 7.5e-46 187.2 119 76.5
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 7.5e-46 187.2 119 76.5
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 1.3e-45 186.4 115 77.4
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 1.3e-45 186.4 115 77.4
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 1.3e-45 186.4 115 77.4
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 1.3e-45 186.4 115 77.4
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 1.7e-45 186.0 115 77.4
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 1.7e-45 186.0 111 81.1
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 2.2e-45 185.7 115 76.5
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 2.2e-45 185.7 115 77.4
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 2.8e-45 185.3 115 76.5
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 2.8e-45 185.3 111 80.2
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 2.8e-45 185.3 115 76.5
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 3.7e-45 184.9 115 76.5
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 4.8e-45 184.5 115 76.5
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 4.8e-45 184.5 115 76.5
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 6.3e-45 184.1 115 76.5
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 1.1e-44 183.3 115 78.3
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 1.8e-44 182.6 115 75.7
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 1.8e-44 182.6 115 75.7
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 1.8e-44 182.6 111 79.3
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 3.1e-44 181.8 115 75.7
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 1.7e-42 176.0 110 77.3
CARHR200930 Cardamine hirsuta HOM05D006044 ORTHO05D007653 1.5e-41 172.9 114 71.9
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 3.2e-41 171.8 114 74.6
Cre03.g158950 Chlamydomonas reinhardtii HOM05D006044 ORTHO05D007653 1.5e-38 162.9 118 66.1
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 3.4e-38 161.8 115 63.5
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 3.4e-38 161.8 87 86.2
AL3G46680 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 4.4e-38 161.4 113 65.5
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 1.4e-36 156.4 80 91.2
MD13G1049300 Malus domestica HOM05D006044 ORTHO05D007653 3.1e-36 155.2 101 73.3
CSS0031497 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 2.0e-35 152.5 129 60.5
Haze_26695 Corylus avellana HOM05D006044 ORTHO05D007653 7.5e-30 134.0 89 62.9
PRCOL_00006242 Prasinoderma coloniale HOM05D006044 ORTHO05D007653 4.9e-29 131.3 90 64.4
EL10Ac9g21533 Beta vulgaris HOM05D006044 ORTHO05D007653 7.8e-27 124.0 86 70.9
AT2G14870 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 2.6e-22 109.0 68 70.6
SGA_v2.0_scaffold34G13906 Striga asiatica HOM05D006044 ORTHO05D007653 3.6e-16 88.6 94 50.0
SalBow1G3729 Salvia bowleyana HOM05D006044 ORTHO05D357234 1.7e-13 79.7 41 87.8
SGA_v2.0_scaffold5G02950 Striga asiatica HOM05D006044 ORTHO05D007653 3.5e-11 72.0 49 67.3
Pp3c14_2340 Physcomitrium patens HOM05D006044 ORTHO05D318821 1.4e-07 60.1 31 83.9
SGA_v2.0_scaffold198G41064 Striga asiatica HOM05D006044 ORTHO05D400222 4.0e-07 58.5 82 42.7
Gorai.003G183300 Gossypium raimondii HOM05D000142 ORTHO05D003173 4.4e-06 55.1 84 33.3
Dinv30820 Davidia involucrata HOM05D001413 ORTHO05D001385 5.8e-06 54.7 72 40.3
MBI19_g02313_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 9.9e-06 53.9 90 32.2
Mapoly0007s0152 Marchantia polymorpha HOM05D003264 ORTHO05D003276 9.9e-06 53.9 83 32.5
Potri.005G024600 Populus trichocarpa HOM05D001413 ORTHO05D001385 9.9e-06 53.9 64 45.3
Potri.006G190900 Populus trichocarpa HOM05D000845 ORTHO05D009756 9.9e-06 53.9 70 42.9
SGA_v2.0_scaffold25G10780 Striga asiatica HOM05D000142 ORTHO05D001253 9.9e-06 53.9 78 35.9


User provided reference genes

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