Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO083G0001 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.2e-249 865.1 430 100.0
SMO111G0153 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.6e-173 612.5 421 79.1
SMO111G0027 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.0e-153 545.0 405 73.8
SMO111G0203 Selaginella moellendorffii HOM05D001088 ORTHO05D013615 5.0e-145 518.5 362 76.8
SMO083G0010 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.6e-135 486.9 379 71.8
SMO111G0226 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.2e-135 485.0 401 69.1
SMO200G0255 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.8e-134 481.5 276 88.0
SMO140G0090 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.6e-129 464.9 394 67.3
SMO111G0113 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 8.1e-127 458.0 380 67.9
SMO111G0064 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.1e-123 444.9 357 69.2
SMO160G0005 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.0e-121 441.0 352 69.6
SMO111G0100 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.7e-116 423.7 486 54.7
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 6.2e-111 405.2 537 48.4
SMO140G0012 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.1e-104 384.4 296 70.3
SMO215G0003 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.3e-102 375.6 327 67.0
SMO140G0066 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.7e-80 302.4 381 50.7
SMO140G0060 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 8.5e-76 288.5 183 85.2
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 2.7e-45 187.2 391 32.0
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 3.5e-45 186.8 488 29.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 5.9e-45 186.0 524 28.4
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 2.9e-44 183.7 539 28.0
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 3.8e-44 183.3 444 28.6
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 1.1e-43 181.8 419 30.5
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.2e-42 178.3 414 30.0
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 1.6e-42 177.9 516 27.7
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.7e-42 177.2 400 30.0
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 4.7e-42 176.4 496 28.0
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 6.1e-42 176.0 493 29.2
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.0e-41 175.3 414 29.7
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.0e-41 175.3 528 27.3
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 1.8e-41 174.5 370 30.8
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 4.0e-41 173.3 518 28.4
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 5.2e-41 172.9 517 27.5
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.2e-40 171.8 523 27.3
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 1.5e-40 171.4 523 27.2
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 2.6e-40 170.6 506 27.7
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 3.4e-40 170.2 496 26.6
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 4.4e-40 169.9 432 30.8
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 4.4e-40 169.9 511 27.8
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 7.5e-40 169.1 503 28.0
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 9.8e-40 168.7 396 29.0
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 9.8e-40 168.7 411 29.0
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.3e-39 168.3 407 28.7
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 2.2e-39 167.5 557 26.9
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 6.3e-39 166.0 562 26.9
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 6.3e-39 166.0 529 27.2
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 6.3e-39 166.0 496 27.0
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.1e-38 165.2 534 26.6
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 1.4e-38 164.9 396 29.5
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 3.1e-38 163.7 406 29.3
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 3.1e-38 163.7 532 26.7
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 3.1e-38 163.7 521 26.7
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.2e-37 161.8 459 27.0
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 1.6e-37 161.4 378 29.1
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 2.0e-37 161.0 532 27.4
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 2.7e-37 160.6 533 26.5
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 2.7e-37 160.6 411 29.4
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 2.7e-37 160.6 465 28.4
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.5e-37 160.2 434 29.5
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 4.5e-37 159.8 456 28.5
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 4.5e-37 159.8 528 25.6
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 5.9e-37 159.5 522 27.0
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 7.7e-37 159.1 508 27.4
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 1.7e-36 157.9 462 27.7
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.7e-36 157.9 407 27.8
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 2.3e-36 157.5 401 30.2
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 3.8e-36 156.8 404 29.0
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 3.8e-36 156.8 386 28.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 5.0e-36 156.4 523 26.8
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 5.0e-36 156.4 525 25.5
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 5.0e-36 156.4 378 28.0
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 6.6e-36 156.0 574 26.0
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 6.6e-36 156.0 532 26.1
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 6.6e-36 156.0 378 28.0
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.6e-36 155.6 532 26.1
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 8.6e-36 155.6 397 28.5
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 8.6e-36 155.6 528 25.9
CAN.G317.9 Capsicum annuum HOM05D003161 ORTHO05D005173 1.1e-35 155.2 398 28.1
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.1e-35 155.2 520 27.5
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 1.5e-35 154.8 525 25.5
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 1.5e-35 154.8 510 26.1
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 1.5e-35 154.8 405 28.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 1.9e-35 154.5 402 27.4
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.5e-35 154.1 525 25.9
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 3.3e-35 153.7 511 25.8
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 3.3e-35 153.7 529 26.5
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 4.2e-35 153.3 481 25.6
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 7.2e-35 152.5 431 27.6
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 9.5e-35 152.1 490 27.3
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.6e-34 151.4 389 28.3
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 1.6e-34 151.4 433 27.5
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 1.6e-34 151.4 378 28.0
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.6e-34 151.4 519 26.4
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.6e-34 151.4 397 27.2
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 4.7e-34 149.8 399 26.1
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.7e-34 149.8 490 26.9
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 6.1e-34 149.4 372 28.0
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 8.0e-34 149.1 387 27.4
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 1.4e-33 148.3 539 24.7
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.8e-33 147.9 490 26.5
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 1.8e-33 147.9 424 26.7
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 3.0e-33 147.1 538 25.7
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 3.0e-33 147.1 531 25.6
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 4.0e-33 146.7 490 26.5
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 4.0e-33 146.7 528 25.0
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 4.0e-33 146.7 515 26.2
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 8.9e-33 145.6 326 31.9
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 1.5e-32 144.8 526 24.9
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 1.5e-32 144.8 526 24.9
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.7e-31 141.4 549 23.7
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 2.9e-31 140.6 472 24.8
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 3.7e-31 140.2 408 26.2
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 8.3e-31 139.0 532 24.6
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 4.1e-30 136.7 417 26.6
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 2.7e-29 134.0 526 24.3
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 5.9e-29 132.9 526 24.7
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 1.7e-28 131.3 469 24.3
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 2.9e-28 130.6 425 27.5
Os07g0203300 Oryza sativa ssp. japonica HOM05D003161 ORTHO05D005173 8.6e-28 129.0 399 27.1
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 1.1e-27 128.6 403 26.8
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 1.9e-27 127.9 417 25.9
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 3.3e-27 127.1 466 24.7
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 4.3e-27 126.7 520 23.3
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 5.6e-27 126.3 533 24.0
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 3.6e-26 123.6 308 28.2
MD14G1049800 Malus domestica HOM05D003161 ORTHO05D005173 1.0e-25 122.1 252 32.5
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.3e-25 120.9 360 30.3
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 3.9e-20 103.6 366 25.4
SHI30029 Sapria himalayana HOM05D003161 ORTHO05D005173 3.3e-19 100.5 502 23.1
Hund18982 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.6e-19 99.8 309 26.2
HPP92_027318 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.2e-18 98.6 289 26.0
HanXRQChr13g0419181 Helianthus annuus HOM05D003161 ORTHO05D009435 4.0e-17 93.6 178 33.1
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 5.2e-17 93.2 154 34.4
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 7.1e-14 82.8 165 32.1
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 1.1e-11 75.5 454 19.8
CSS0040264 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.6e-10 70.5 139 30.2
HPP92_015877 Vanilla planifolia HOM05D003161 ORTHO05D005173 3.6e-10 70.5 136 30.9
Medtr3g069250 Medicago truncatula HOM05D003161 ORTHO05D013615 3.1e-09 67.4 169 29.0
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 5.2e-09 66.6 221 25.8
Potri.014G148500 Populus trichocarpa HOM05D006611 ORTHO05D008093 6.8e-09 66.2 174 31.6
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 6.8e-09 66.2 146 28.1
CiPaw.01G110700 Carya illinoinensis HOM05D006611 ORTHO05D008093 1.7e-07 61.6 151 29.8
HPP92_003169 Vanilla planifolia HOM05D006611 ORTHO05D008093 2.2e-07 61.2 145 28.3
CDE09G1077 Ceratophyllum demersum HOM05D006611 ORTHO05D008093 2.9e-07 60.8 154 28.6
Hma1.2p1_0349F.1_g132210 Hydrangea macrophylla HOM05D006611 ORTHO05D008093 2.9e-07 60.8 181 29.3
TWI15G1006 Tripterygium wilfordii HOM05D006611 ORTHO05D008093 2.9e-07 60.8 93 39.8
Dinv27167 Davidia involucrata HOM05D006611 ORTHO05D008093 3.7e-07 60.5 98 34.7
Atru.chr3.1749 Acer truncatum HOM05D006611 ORTHO05D008093 4.9e-07 60.1 153 30.1
Cfa008675 Carpinus fangiana HOM05D006611 ORTHO05D008093 4.9e-07 60.1 124 31.5
Hma1.2p1_0349F.1_g132215 Hydrangea macrophylla HOM05D006611 ORTHO05D008093 4.9e-07 60.1 154 31.2
Sed0010349 Sechium edule HOM05D006611 ORTHO05D008093 4.9e-07 60.1 145 31.7
unitig_37.g12002 Utricularia gibba HOM05D006611 ORTHO05D008093 6.4e-07 59.7 93 37.6
Haze_11695 Corylus avellana HOM05D006611 ORTHO05D008093 8.4e-07 59.3 118 33.1
Eucgr.H02624 Eucalyptus grandis HOM05D006611 ORTHO05D008093 8.4e-07 59.3 175 28.6
TAR362G0137 Trochodendron aralioides HOM05D006611 ORTHO05D008093 8.4e-07 59.3 149 30.2
Atru.BG.109.p Acer truncatum HOM05D006611 ORTHO05D008093 1.1e-06 58.9 177 29.4
Cpa.g.c30743.1 Carica papaya HOM05D006611 ORTHO05D008093 1.4e-06 58.5 149 31.5
COL.COLO4_35975 Corchorus olitorius HOM05D006611 ORTHO05D008093 1.4e-06 58.5 149 30.9
FAN22G2055 Fragaria x ananassa HOM05D006611 ORTHO05D008093 1.4e-06 58.5 166 31.3
MELO3C017732.2 Cucumis melo HOM05D006611 ORTHO05D008093 1.9e-06 58.2 120 31.7
FvH4_4g12580 Fragaria vesca HOM05D006611 ORTHO05D008093 1.9e-06 58.2 166 30.7
MBI07_g21331_MAGBIO Magnolia biondii HOM05D006611 ORTHO05D008093 1.9e-06 58.2 127 31.5
Manes.05G193800 Manihot esculenta HOM05D006611 ORTHO05D008093 1.9e-06 58.2 123 32.5
VMungo1383G2825 Vigna mungo HOM05D006611 ORTHO05D008093 1.9e-06 58.2 93 34.4
Zm00001eb110810 Zea mays HOM05D004115 ORTHO05D005004 1.9e-06 58.2 92 34.8
Migut.G01149 Erythranthe guttata HOM05D006611 ORTHO05D008093 2.4e-06 57.8 93 34.4
FAN07G1495 Fragaria x ananassa HOM05D006611 ORTHO05D008093 2.4e-06 57.8 166 30.1
RcHm_v2.0_Chr4g0411421 Rosa chinensis HOM05D006611 ORTHO05D008093 2.4e-06 57.8 166 30.7
MSTRG.4275 Avicennia marina HOM05D006611 ORTHO05D008093 4.1e-06 57.0 93 37.6
Ciclev10005159m.g Citrus clementina HOM05D006611 ORTHO05D008093 4.1e-06 57.0 170 31.2
SalBow2G1730 Salvia bowleyana HOM05D006611 ORTHO05D008093 4.1e-06 57.0 200 30.0
Sabra14G0112100 Salix brachista HOM05D006611 ORTHO05D008093 5.4e-06 56.6 93 37.6
FAN17G1417 Fragaria x ananassa HOM05D006611 ORTHO05D008093 7.1e-06 56.2 93 35.5
Thecc.04G189800 Theobroma cacao HOM05D006611 ORTHO05D008093 7.1e-06 56.2 93 33.3
AUR62021454 Chenopodium quinoa HOM05D004115 ORTHO05D005004 9.2e-06 55.8 78 35.9
Duzib268G0202 Durio zibethinus HOM05D006611 ORTHO05D008093 9.2e-06 55.8 153 30.1
PGR119G2551 Punica granatum HOM05D006611 ORTHO05D008093 9.2e-06 55.8 93 33.3
Rhsim09G0063200 Rhododendron simsii HOM05D006611 ORTHO05D008093 9.2e-06 55.8 93 32.3


User provided reference genes

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