Gene: Thecc.04G189800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G189800
  • Transcript Identifier Thecc.04G189800.2
  • Gene Type Coding gene
  • Location Chromosome_4 : 28054332-28058153 : negative

Gene Family Information

  • ID HOM05D006611
  • #Genes/#Species 121/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G189800.v2.1
  • pacid 42022238
  • ancestorIdentifier Thecc1EG020171.CGDv1.1
  • ancestorIdentifier Thecc1EG020171t3.CGDv1.1

Descriptions

  • Description Nucleic acid-binding proteins superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G23700
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G23700
GO:0000481
ISO
PLAZA Integrative Orthologymaturation of 5S rRNA AT3G23700
GO:0032508
ISO
PLAZA Integrative OrthologyDNA duplex unwinding AT3G23700
GO:0034337
ISO
PLAZA Integrative OrthologyRNA folding AT3G23700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G23700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G23700
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G23700
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G23700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022967 RNA-binding domain, S1
IPR003029 S1 domain
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
35.1 not assigned.annotated