Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 1.4e-72 276.2 140 100.0
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 1.8e-59 232.6 129 92.2
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 9.2e-56 220.3 129 89.9
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 5.2e-43 177.9 126 70.6
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 1.3e-41 173.3 127 71.7
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 1.3e-41 173.3 128 67.2
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 2.2e-41 172.6 126 70.6
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 1.4e-40 169.9 126 66.7
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 1.4e-40 169.9 126 66.7
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.4e-40 169.9 126 69.8
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 1.9e-40 169.5 126 66.7
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 2.4e-40 169.1 126 69.0
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 5.4e-40 167.9 126 66.7
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 7.1e-40 167.5 126 68.3
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 9.3e-40 167.2 126 67.5
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 2.1e-39 166.0 126 65.1
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 2.1e-39 166.0 126 65.9
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 2.7e-39 165.6 126 67.5
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-39 165.2 126 66.7
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-39 165.2 126 66.7
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-39 165.2 126 66.7
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-39 165.2 126 66.7
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 3.5e-39 165.2 126 66.7
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 4.6e-39 164.9 126 68.3
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 4.6e-39 164.9 126 66.7
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 6.0e-39 164.5 126 65.9
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 6.0e-39 164.5 126 65.1
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 7.8e-39 164.1 129 65.9
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 1.0e-38 163.7 126 63.5
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 1.3e-38 163.3 126 67.5
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 1.3e-38 163.3 126 64.3
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 1.3e-38 163.3 126 64.3
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 1.7e-38 162.9 126 64.3
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 1.7e-38 162.9 123 67.5
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 2.3e-38 162.5 126 65.9
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 2.3e-38 162.5 126 65.1
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 3.0e-38 162.2 126 65.1
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 3.0e-38 162.2 126 65.9
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 3.0e-38 162.2 127 63.0
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 3.9e-38 161.8 126 67.5
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 3.9e-38 161.8 126 65.1
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 3.9e-38 161.8 126 65.9
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 5.1e-38 161.4 134 62.7
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 5.1e-38 161.4 126 62.7
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 5.1e-38 161.4 126 63.5
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 8.7e-38 160.6 125 64.8
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 1.5e-37 159.8 126 63.5
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 1.9e-37 159.5 126 65.9
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 1.9e-37 159.5 127 61.4
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.9e-37 159.5 127 61.4
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.9e-37 159.5 127 61.4
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.9e-37 159.5 127 61.4
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 1.9e-37 159.5 126 63.5
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 1.9e-37 159.5 126 65.9
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.9e-37 159.5 126 63.5
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-37 159.1 127 61.4
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 3.3e-37 158.7 126 63.5
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 4.3e-37 158.3 129 62.8
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 4.3e-37 158.3 136 62.5
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 5.6e-37 157.9 129 63.6
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 5.6e-37 157.9 126 63.5
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 5.6e-37 157.9 126 63.5
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 7.3e-37 157.5 126 62.7
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 7.3e-37 157.5 126 62.7
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 7.3e-37 157.5 126 65.1
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.3e-36 156.8 126 64.3
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 1.3e-36 156.8 126 61.9
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 1.6e-36 156.4 126 60.3
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.6e-36 156.4 127 60.6
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 1.6e-36 156.4 126 63.5
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 2.1e-36 156.0 129 62.8
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 2.1e-36 156.0 126 61.9
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 2.1e-36 156.0 125 64.8
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 2.1e-36 156.0 126 60.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 3.6e-36 155.2 126 61.1
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 4.8e-36 154.8 126 59.5
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 1.1e-35 153.7 126 57.9
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.4e-35 153.3 127 59.8
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.8e-35 152.9 126 61.1
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 1.8e-35 152.9 126 61.1
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 2.4e-35 152.5 126 61.1
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 3.1e-35 152.1 127 63.0
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 5.3e-35 151.4 126 61.9
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 5.3e-35 151.4 126 62.7
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 9.0e-35 150.6 126 62.7
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 1.2e-34 150.2 143 59.4
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 1.2e-34 150.2 157 52.9
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 1.5e-34 149.8 126 59.5
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 2.0e-34 149.4 126 63.5
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 5.8e-34 147.9 127 57.5
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 7.6e-34 147.5 127 56.7
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 9.9e-34 147.1 126 57.9
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 9.9e-34 147.1 127 55.9
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 9.9e-34 147.1 127 55.9
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 9.9e-34 147.1 113 67.3
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 1.7e-33 146.4 127 58.3
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 7.1e-32 141.0 126 60.3
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 9.3e-32 140.6 135 57.0
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 1.2e-31 140.2 135 54.8
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 1.6e-31 139.8 126 57.9
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 2.1e-31 139.4 113 61.1
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 6.2e-28 127.9 126 53.2
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 1.2e-26 123.6 95 64.2
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 5.8e-26 121.3 89 62.9
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 3.8e-25 118.6 89 61.8
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 5.5e-24 114.8 128 46.1
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 7.1e-24 114.4 113 50.4
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 1.2e-23 113.6 76 65.8
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 1.8e-22 109.8 126 49.2
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 1.6e-20 103.2 71 69.0
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 2.8e-20 102.4 99 57.6
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 2.4e-19 99.4 131 42.0
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 1.1e-16 90.5 128 40.6
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 9.3e-16 87.4 74 62.2
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 1.3e-14 83.6 55 69.1
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 2.5e-13 79.3 53 69.8
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 5.7e-13 78.2 126 38.1
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 1.6e-07 60.1 87 39.1
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 6.1e-07 58.2 48 60.4
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 6.7e-06 54.7 79 35.4


User provided reference genes

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