Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36072 Sapria himalayana HOM05D002182 ORTHO05D004671 1.0e-63 246.5 120 100.0
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 6.3e-29 131.0 106 67.0
MBI07_g47060_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 6.3e-29 131.0 110 64.5
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 8.2e-29 130.6 106 67.0
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 1.1e-28 130.2 106 66.0
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 1.4e-28 129.8 105 66.7
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 1.4e-28 129.8 110 63.6
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 1.8e-28 129.4 106 66.0
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 2.4e-28 129.0 106 65.1
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 2.4e-28 129.0 106 66.0
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 2.4e-28 129.0 106 66.0
FAN26G0537 Fragaria x ananassa HOM05D002182 ORTHO05D004671 2.4e-28 129.0 106 66.0
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 2.4e-28 129.0 106 66.0
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 4.1e-28 128.3 106 66.0
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 4.1e-28 128.3 106 65.1
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 4.1e-28 128.3 106 65.1
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 4.1e-28 128.3 106 65.1
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 4.1e-28 128.3 110 62.7
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 5.3e-28 127.9 110 63.6
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 5.3e-28 127.9 106 65.1
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 5.3e-28 127.9 110 62.7
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 5.3e-28 127.9 106 65.1
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 7.0e-28 127.5 106 65.1
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 7.0e-28 127.5 106 65.1
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 7.0e-28 127.5 106 65.1
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 9.1e-28 127.1 106 64.2
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 9.1e-28 127.1 106 65.1
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 9.1e-28 127.1 106 65.1
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 1.6e-27 126.3 106 64.2
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 1.6e-27 126.3 106 64.2
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 2.0e-27 125.9 110 61.8
HPP92_005922 Vanilla planifolia HOM05D002182 ORTHO05D004671 2.0e-27 125.9 111 62.2
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 2.6e-27 125.6 106 64.2
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 2.6e-27 125.6 106 64.2
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 2.6e-27 125.6 106 64.2
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 3.5e-27 125.2 106 63.2
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 4.5e-27 124.8 106 63.2
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 5.9e-27 124.4 111 61.3
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 5.9e-27 124.4 106 63.2
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 5.9e-27 124.4 111 61.3
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 7.7e-27 124.0 106 64.2
QL10p041326 Quercus lobata HOM05D002182 ORTHO05D004671 7.7e-27 124.0 106 63.2
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 7.7e-27 124.0 106 64.2
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 1.0e-26 123.6 106 63.2
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 1.0e-26 123.6 106 63.2
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 1.0e-26 123.6 106 63.2
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 1.3e-26 123.2 106 64.2
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 1.3e-26 123.2 106 63.2
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 1.3e-26 123.2 106 63.2
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 1.3e-26 123.2 106 63.2
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 1.7e-26 122.9 106 64.2
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 1.7e-26 122.9 110 60.9
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 1.7e-26 122.9 110 60.9
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 1.7e-26 122.9 106 64.2
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 2.2e-26 122.5 106 62.3
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 2.9e-26 122.1 106 63.2
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 2.9e-26 122.1 110 60.9
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 3.8e-26 121.7 106 63.2
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 3.8e-26 121.7 106 65.1
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 3.8e-26 121.7 106 62.3
Nitab4.5_0000120g0160 Nicotiana tabacum HOM05D002182 ORTHO05D004671 5.0e-26 121.3 110 60.0
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
C02p63010 Brassica napus HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
BolC2t12375H Brassica oleracea HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 6.5e-26 120.9 105 62.9
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 6.5e-26 120.9 106 63.2
Solyc05g014730.1 Solanum lycopersicum HOM05D002182 ORTHO05D004671 8.5e-26 120.6 106 62.3
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 1.1e-25 120.2 106 62.3
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 1.1e-25 120.2 106 62.3
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 1.9e-25 119.4 119 58.0
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 3.2e-25 118.6 111 59.5
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 4.2e-25 118.2 81 74.1
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 4.2e-25 118.2 110 60.0
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 5.5e-25 117.9 82 73.2
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 7.2e-25 117.5 111 60.4
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 9.4e-25 117.1 107 60.7
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 2.7e-24 115.5 106 60.4
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 6.1e-24 114.4 106 59.4
unitig_62.g23374 Utricularia gibba HOM05D002182 ORTHO05D004671 6.1e-24 114.4 106 59.4
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 1.0e-23 113.6 106 59.4
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 1.4e-23 113.2 110 57.3
Nitab4.5_0001277g0030 Nicotiana tabacum HOM05D002182 ORTHO05D004671 3.0e-23 112.1 101 60.4
CSS0042552 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 5.2e-23 111.3 76 73.7
vmacro12744 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 5.2e-23 111.3 104 61.5
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 1.5e-22 109.8 106 58.5
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 3.3e-22 108.6 106 57.5
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 2.8e-21 105.5 110 54.5
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 4.8e-21 104.8 105 55.2
Actinidia20028 Actinidia chinensis HOM05D002182 ORTHO05D004671 1.8e-15 86.3 66 66.7
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.0e-15 85.5 66 66.7
CBR_g74 Chara braunii HOM05D002182 ORTHO05D004671 4.0e-15 85.1 106 46.2
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 6.8e-15 84.3 66 65.2
PRCOL_00003192 Prasinoderma coloniale HOM05D002182 ORTHO05D004671 2.7e-11 72.4 78 48.7
PSO170G3411 Papaver somniferum HOM05D002182 ORTHO05D004671 1.0e-07 60.5 115 36.5
MCO11G433 Micromonas commoda HOM05D002182 ORTHO05D004671 4.0e-07 58.5 107 40.2


User provided reference genes

Program Settings