Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21602 Sapria himalayana HOM05D003938 ORTHO05D004759 1.4e-113 412.9 204 100.0
Dinv19621 Davidia involucrata HOM05D003938 ORTHO05D004759 5.2e-23 112.1 124 51.6
Potri.005G097500 Populus trichocarpa HOM05D003938 ORTHO05D004759 2.6e-22 109.8 189 42.9
TWI74G0164 Tripterygium wilfordii HOM05D003938 ORTHO05D004759 3.3e-22 109.4 154 44.2
CSS0016392 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 9.7e-22 107.8 131 46.6
CSS0024659 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 9.7e-22 107.8 131 46.6
PSO675G8491 Papaver somniferum HOM05D003938 ORTHO05D004759 4.8e-21 105.5 73 64.4
CSS0000259 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.1e-20 104.4 154 43.5
MD05G1222400 Malus domestica HOM05D003938 ORTHO05D004759 1.4e-20 104.0 198 42.4
GSVIVG01020281001 Vitis vinifera HOM05D003938 ORTHO05D004759 1.8e-20 103.6 127 46.5
Sabra05G0079800 Salix brachista HOM05D003938 ORTHO05D004759 2.4e-20 103.2 184 41.8
TAR626G0088 Trochodendron aralioides HOM05D003938 ORTHO05D004759 2.4e-20 103.2 116 52.6
CSS0019207 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 3.1e-20 102.8 69 65.2
Duzib168G1061 Durio zibethinus HOM05D003938 ORTHO05D004759 3.1e-20 102.8 157 42.7
PSO675G9176 Papaver somniferum HOM05D003938 ORTHO05D004759 4.1e-20 102.4 211 37.0
Prupe.4G137900 Prunus persica HOM05D003938 ORTHO05D004759 7.0e-20 101.7 210 39.5
CSS0007376 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 5.9e-19 98.6 154 41.6
FvH4_3g15530 Fragaria vesca HOM05D003938 ORTHO05D004759 5.9e-19 98.6 151 44.4
Manes.06G173850 Manihot esculenta HOM05D003938 ORTHO05D004759 5.9e-19 98.6 194 38.1
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 1.0e-18 97.8 202 39.1
Ciclev10004604m.g Citrus clementina HOM05D003938 ORTHO05D004759 1.3e-18 97.4 130 44.6
CANSAT80G1380 Cannabis sativa HOM05D003938 ORTHO05D004759 3.8e-18 95.9 136 45.6
FAN21G1947 Fragaria x ananassa HOM05D003938 ORTHO05D004759 5.0e-18 95.5 212 38.2
Glyma.15G213200 Glycine max HOM05D003938 ORTHO05D004759 6.5e-18 95.1 188 38.8
CsaV3_7G022770 Cucumis sativus L. HOM05D003938 ORTHO05D004759 8.5e-18 94.7 74 63.5
MD10G1204000 Malus domestica HOM05D003938 ORTHO05D004759 8.5e-18 94.7 190 38.4
RcHm_v2.0_Chr5g0026161 Rosa chinensis HOM05D003938 ORTHO05D004759 8.5e-18 94.7 229 36.7
MSTRG.16112 Avicennia marina HOM05D003938 ORTHO05D004759 1.1e-17 94.4 207 37.7
PSO717G0129 Papaver somniferum HOM05D003938 ORTHO05D004759 1.1e-17 94.4 145 38.6
MELO3C012622.2 Cucumis melo HOM05D003938 ORTHO05D004759 1.9e-17 93.6 74 62.2
Thecc.09G180900 Theobroma cacao HOM05D003938 ORTHO05D004759 1.9e-17 93.6 222 37.8
Lalb_Chr01g0007211 Lupinus albus HOM05D003938 ORTHO05D004759 2.5e-17 93.2 185 43.2
PSO447G0031 Papaver somniferum HOM05D003938 ORTHO05D004759 3.2e-17 92.8 129 41.9
SGA_v2.0_scaffold7G03579 Striga asiatica HOM05D003938 ORTHO05D004759 4.2e-17 92.4 205 36.1
Nn7g37935 Nelumbo nucifera HOM05D003938 ORTHO05D004759 5.5e-17 92.0 201 37.8
Psat4g174120 Pisum sativum HOM05D003938 ORTHO05D004759 5.5e-17 92.0 73 64.4
Sopen07g034590 Solanum pennellii HOM05D003938 ORTHO05D004759 5.5e-17 92.0 216 35.6
Cc05_g16030 Coffea canephora HOM05D003938 ORTHO05D004759 7.2e-17 91.7 198 36.9
Nitab4.5_0009317g0010 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.2e-16 90.9 216 35.2
ClCG09G022610 Citrullus lanatus HOM05D003938 ORTHO05D004759 1.6e-16 90.5 191 37.7
Medtr6g084140 Medicago truncatula HOM05D003938 ORTHO05D004759 1.6e-16 90.5 197 36.0
VMungo1127G1443 Vigna mungo HOM05D003938 ORTHO05D004759 1.6e-16 90.5 186 39.2
Gohir.A05G003300 Gossypium hirsutum HOM05D003938 ORTHO05D004759 2.1e-16 90.1 204 35.8
Sed0018665 Sechium edule HOM05D003938 ORTHO05D004759 2.7e-16 89.7 217 37.3
FAN16G1651 Fragaria x ananassa HOM05D003938 ORTHO05D004759 3.6e-16 89.4 213 36.2
Peaxi162Scf00452g00848 Petunia axillaris HOM05D003938 ORTHO05D004759 3.6e-16 89.4 180 37.2
Phvul.011G177175 Phaseolus vulgaris HOM05D003938 ORTHO05D004759 4.7e-16 89.0 160 39.4
Ca_12645_v3 Cicer arietinum L. HOM05D003938 ORTHO05D004759 6.1e-16 88.6 100 53.0
Nitab4.5_0001749g0120 Nicotiana tabacum HOM05D003938 ORTHO05D004759 6.1e-16 88.6 213 34.7
QL04p077115 Quercus lobata HOM05D003938 ORTHO05D004759 6.1e-16 88.6 194 38.1
A08p00110 Brassica napus HOM05D000173 ORTHO05D008065 1.0e-15 87.8 74 54.1
BraA08t32068Z Brassica rapa HOM05D003938 ORTHO05D008065 1.0e-15 87.8 74 54.1
Carub.0001s4300 Capsella rubella HOM05D003938 ORTHO05D004759 1.4e-15 87.4 74 54.1
FAN25G2080 Fragaria x ananassa HOM05D003938 ORTHO05D004759 1.4e-15 87.4 212 37.3
Gorai.009G003300 Gossypium raimondii HOM05D003938 ORTHO05D004759 1.4e-15 87.4 221 34.4
PGR119G1566 Punica granatum HOM05D003938 ORTHO05D004759 1.4e-15 87.4 210 36.2
EL10Ac2g03350 Beta vulgaris HOM05D003938 ORTHO05D004759 1.8e-15 87.0 194 36.1
TPR.G9407 Trifolium pratense HOM05D003938 ORTHO05D004759 1.8e-15 87.0 193 38.3
Glyma.19G004200 Glycine max HOM05D003938 ORTHO05D004759 2.3e-15 86.7 152 40.8
vmacro11660 Vaccinium macrocarpon HOM05D003938 ORTHO05D004759 2.3e-15 86.7 180 37.2
Solyc07g066420.4 Solanum lycopersicum HOM05D003938 ORTHO05D004759 3.0e-15 86.3 215 35.8
Actinidia07348 Actinidia chinensis HOM05D003938 ORTHO05D004759 4.0e-15 85.9 205 36.1
Haze_07837 Corylus avellana HOM05D002071 ORTHO05D004759 4.0e-15 85.9 234 34.2
HanXRQChr05g0160881 Helianthus annuus HOM05D003938 ORTHO05D004759 4.0e-15 85.9 238 31.5
unitig_26.g10081 Utricularia gibba HOM05D003938 ORTHO05D004759 4.0e-15 85.9 227 33.5
Thhalv10011414m.g Eutrema salsugineum HOM05D003938 ORTHO05D004759 5.2e-15 85.5 74 51.4
TPR.G22448 Trifolium pratense HOM05D003938 ORTHO05D004759 5.2e-15 85.5 200 34.5
Lj3g0013935 Lotus japonicus HOM05D003938 ORTHO05D004759 6.7e-15 85.1 188 35.6
Os06g0670500 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 6.7e-15 85.1 218 34.4
DCAR_013742 Daucus carota HOM05D003938 ORTHO05D004759 8.8e-15 84.7 201 35.8
ATR0763G204 Amborella trichopoda HOM05D003938 ORTHO05D004759 1.2e-14 84.3 73 56.2
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea HOM05D003938 ORTHO05D004759 1.5e-14 84.0 160 35.0
Sc09g0007280 Simmondsia chinensis HOM05D003938 ORTHO05D004759 1.5e-14 84.0 202 38.6
PGSC0003DMG400022237 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.5e-14 84.0 216 34.3
Atru.chr1.190 Acer truncatum HOM05D003938 ORTHO05D004759 2.0e-14 83.6 203 36.5
AUR62037621 Chenopodium quinoa HOM05D003938 ORTHO05D004759 2.6e-14 83.2 149 37.6
Medtr8g442420 Medicago truncatula HOM05D003938 ORTHO05D004759 5.7e-14 82.0 205 36.6
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea HOM05D003938 ORTHO05D004759 7.5e-14 81.6 189 33.9
BcaB04g16924 Brassica carinata HOM05D003938 ORTHO05D004759 9.7e-14 81.3 124 38.7
BolC3t21636H Brassica oleracea HOM05D003938 ORTHO05D008065 9.7e-14 81.3 124 38.7
THA.LOC104822756 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 9.7e-14 81.3 112 45.5
CDE01G0219 Ceratophyllum demersum HOM05D003938 ORTHO05D004759 1.3e-13 80.9 158 38.6
C03p93390 Brassica napus HOM05D003938 ORTHO05D008065 1.7e-13 80.5 119 40.3
Zm00001eb274050 Zea mays HOM05D003938 ORTHO05D004759 1.7e-13 80.5 172 37.2
FAN11G2591 Fragaria x ananassa HOM05D003938 ORTHO05D004759 2.8e-13 79.7 174 36.8
AT1G53720 Arabidopsis thaliana HOM05D003938 ORTHO05D004759 3.7e-13 79.3 146 39.0
CAN.G943.34 Capsicum annuum HOM05D003938 ORTHO05D004759 3.7e-13 79.3 219 36.5
Eucgr.F01467 Eucalyptus grandis HOM05D003938 ORTHO05D004759 4.8e-13 79.0 189 36.5
Aa31LG10G170 Aethionema arabicum HOM05D003938 ORTHO05D004759 6.3e-13 78.6 162 34.6
AL1G62420 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 1.1e-12 77.8 157 38.2
AUR62040863 Chenopodium quinoa HOM05D003938 ORTHO05D004759 1.1e-12 77.8 124 41.1
Lsat_1_v5_gn_7_71321 Lactuca sativa HOM05D003938 ORTHO05D004759 1.8e-12 77.0 207 32.4
Eucgr.F01469 Eucalyptus grandis HOM05D003938 ORTHO05D004759 3.1e-12 76.3 203 33.0
ECA240G3729 Erigeron canadensis HOM05D003938 ORTHO05D004759 1.2e-11 74.3 167 35.9
Potri.007G067000 Populus trichocarpa HOM05D003938 ORTHO05D004759 2.7e-11 73.2 187 36.4
CARHR044020 Cardamine hirsuta HOM05D003938 ORTHO05D004759 5.9e-11 72.0 169 34.9
HPP92_008853 Vanilla planifolia HOM05D003938 ORTHO05D004759 2.5e-09 66.6 183 34.4
HPP92_008859 Vanilla planifolia HOM05D003938 ORTHO05D004759 2.5e-09 66.6 240 32.1
Migut.M01560 Erythranthe guttata HOM05D003938 ORTHO05D004759 3.2e-09 66.2 223 30.9
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis HOM05D003938 ORTHO05D004759 2.7e-08 63.2 89 41.6
Lj8A187T28 Lonicera japonica HOM05D003938 ORTHO05D004759 1.0e-07 61.2 35 80.0
CiPaw.01G119900 Carya illinoinensis HOM05D003938 ORTHO05D004759 2.3e-07 60.1 37 73.0
Pp3c1_5600 Physcomitrium patens HOM05D003938 ORTHO05D004759 2.3e-07 60.1 233 33.0
Mapoly0010s0175 Marchantia polymorpha HOM05D003938 ORTHO05D004759 8.8e-07 58.2 181 32.6
FAN08G3613 Fragaria x ananassa HOM05D020646 ORTHO05D015666 1.5e-06 57.4 61 49.2
FAN18G2416 Fragaria x ananassa HOM05D020646 ORTHO05D015666 5.7e-06 55.5 63 46.0


User provided reference genes

Program Settings