Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 1.9e-167 592.4 295 100.0
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 8.5e-19 98.6 109 51.4
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.5e-18 97.1 99 52.5
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 3.2e-18 96.7 109 50.5
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 5.5e-18 95.9 98 53.1
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 7.2e-18 95.5 109 51.4
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 1.6e-17 94.4 98 52.0
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 1.6e-17 94.4 99 50.5
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 2.1e-17 94.0 109 49.5
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 2.7e-17 93.6 112 49.1
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 3.6e-17 93.2 98 51.0
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 4.7e-17 92.8 109 49.5
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 4.7e-17 92.8 109 49.5
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 4.7e-17 92.8 99 51.5
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 6.1e-17 92.4 109 47.7
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 8.0e-17 92.0 109 47.7
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 8.0e-17 92.0 109 46.8
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 1.0e-16 91.7 95 51.6
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 1.0e-16 91.7 109 47.7
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 1.0e-16 91.7 109 48.6
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 1.4e-16 91.3 128 44.5
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 1.4e-16 91.3 116 44.8
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.8e-16 90.9 98 50.0
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.8e-16 90.9 109 48.6
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.3e-16 90.5 109 46.8
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.3e-16 90.5 134 39.6
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 2.3e-16 90.5 114 44.7
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 3.0e-16 90.1 99 49.5
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 3.0e-16 90.1 99 49.5
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 3.0e-16 90.1 109 47.7
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 4.0e-16 89.7 112 46.4
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 4.0e-16 89.7 101 50.5
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 5.2e-16 89.4 99 48.5
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 5.2e-16 89.4 98 50.0
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 5.2e-16 89.4 99 48.5
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 6.8e-16 89.0 98 50.0
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 6.8e-16 89.0 99 50.5
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 8.8e-16 88.6 98 49.0
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 8.8e-16 88.6 98 49.0
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 8.8e-16 88.6 109 45.0
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 8.8e-16 88.6 99 47.5
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.2e-15 88.2 98 52.0
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.2e-15 88.2 115 47.0
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.5e-15 87.8 109 47.7
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 1.5e-15 87.8 112 47.3
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.5e-15 87.8 112 47.3
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 2.0e-15 87.4 138 41.3
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 2.6e-15 87.0 109 45.0
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 2.6e-15 87.0 99 47.5
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 2.6e-15 87.0 112 44.6
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 3.4e-15 86.7 98 49.0
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 4.4e-15 86.3 111 45.0
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 4.4e-15 86.3 101 47.5
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 5.7e-15 85.9 98 48.0
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 7.5e-15 85.5 98 46.9
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 9.7e-15 85.1 98 45.9
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 9.7e-15 85.1 98 46.9
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 9.7e-15 85.1 98 46.9
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 9.7e-15 85.1 98 46.9
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 1.3e-14 84.7 98 46.9
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 1.7e-14 84.3 98 50.0
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 1.7e-14 84.3 98 44.9
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 2.2e-14 84.0 98 46.9
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 2.8e-14 83.6 109 45.0
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 3.7e-14 83.2 98 45.9
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 3.7e-14 83.2 98 43.9
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 3.1e-13 80.1 161 37.9
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 1.2e-12 78.2 99 42.4
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 1.6e-12 77.8 105 46.7
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 1.6e-12 77.8 90 46.7
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.6e-12 77.8 99 47.5
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 3.5e-12 76.6 122 37.7
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 4.5e-12 76.3 150 34.0
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 3.8e-11 73.2 90 44.4
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 6.5e-11 72.4 86 45.3
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 4.2e-10 69.7 113 43.4
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 5.5e-10 69.3 66 56.1
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 7.2e-10 68.9 81 46.9
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 9.4e-10 68.6 100 42.0
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.6e-09 67.8 47 66.0
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 2.7e-09 67.0 94 40.4
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 2.7e-09 67.0 110 40.0
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 2.7e-09 67.0 99 41.4
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 4.7e-09 66.2 150 30.7
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 6.1e-09 65.9 149 33.6
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 1.0e-08 65.1 96 43.8
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 3.0e-08 63.5 143 33.6
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 6.8e-08 62.4 128 32.8
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 6.8e-08 62.4 129 33.3
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 1.2e-07 61.6 110 36.4
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 1.5e-07 61.2 61 52.5
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 2.0e-07 60.8 143 30.8
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 2.0e-07 60.8 110 39.1
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 7.5e-07 58.9 113 34.5
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 9.8e-07 58.5 99 39.4
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 1.7e-06 57.8 123 35.0
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 2.8e-06 57.0 137 32.8
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 3.7e-06 56.6 37 67.6
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 4.8e-06 56.2 127 33.9


User provided reference genes

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