Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41064 Striga asiatica HOM05D006044 ORTHO05D400222 8.5e-99 363.6 177 100.0
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 4.8e-09 65.5 150 34.0
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 8.2e-09 64.7 102 42.2
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 1.8e-08 63.5 102 41.2
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 1.8e-08 63.5 102 41.2
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 1.8e-08 63.5 102 41.2
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 2.4e-08 63.2 102 41.2
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.4e-08 63.2 102 41.2
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.4e-08 63.2 102 41.2
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 3.1e-08 62.8 103 40.8
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 3.1e-08 62.8 102 41.2
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 4.1e-08 62.4 102 42.2
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 4.1e-08 62.4 102 41.2
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 4.1e-08 62.4 135 35.6
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 5.3e-08 62.0 105 39.0
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 5.3e-08 62.0 109 38.5
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 6.9e-08 61.6 92 40.2
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 6.9e-08 61.6 95 44.2
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 9.0e-08 61.2 120 36.7
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 9.0e-08 61.2 99 41.4
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 9.0e-08 61.2 102 40.2
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 40.2
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 40.2
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 1.2e-07 60.8 102 39.2
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 1.5e-07 60.5 109 36.7
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 1.5e-07 60.5 99 40.4
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 1.5e-07 60.5 102 40.2
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 1.5e-07 60.5 102 39.2
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 2.0e-07 60.1 102 39.2
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 2.0e-07 60.1 102 39.2
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 42.4
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 41.2
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 2.6e-07 59.7 98 39.8
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 2.6e-07 59.7 120 35.0
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 41.2
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 2.6e-07 59.7 109 36.7
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 41.2
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 41.2
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 2.6e-07 59.7 85 41.2
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 2.6e-07 59.7 109 36.7
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 2.6e-07 59.7 102 39.2
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 3.4e-07 59.3 85 41.2
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 3.4e-07 59.3 101 38.6
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 3.4e-07 59.3 101 38.6
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 3.4e-07 59.3 85 41.2
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 3.4e-07 59.3 102 38.2
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 3.4e-07 59.3 85 41.2
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 3.4e-07 59.3 85 41.2
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 4.5e-07 58.9 78 46.2
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 4.5e-07 58.9 78 46.2
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 4.5e-07 58.9 78 46.2
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 4.5e-07 58.9 102 38.2
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 4.5e-07 58.9 102 38.2
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 4.5e-07 58.9 102 38.2
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 5.9e-07 58.5 109 35.8
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 5.9e-07 58.5 119 36.1
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 5.9e-07 58.5 102 38.2
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 5.9e-07 58.5 85 41.2
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 5.9e-07 58.5 85 41.2
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 5.9e-07 58.5 85 40.0
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 5.9e-07 58.5 102 38.2
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 7.7e-07 58.2 85 40.0
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 7.7e-07 58.2 85 40.0
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 7.7e-07 58.2 85 40.0
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 7.7e-07 58.2 102 38.2
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 7.7e-07 58.2 85 40.0
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 1.0e-06 57.8 92 37.0
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 1.0e-06 57.8 92 37.0
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 1.0e-06 57.8 92 37.0
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 1.3e-06 57.4 78 43.6
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 1.3e-06 57.4 92 37.0
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 1.3e-06 57.4 78 43.6
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 1.3e-06 57.4 82 42.7
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 1.7e-06 57.0 78 43.6
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 1.7e-06 57.0 85 38.8
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 2.9e-06 56.2 82 40.2
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 6.5e-06 55.1 92 39.1
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 8.5e-06 54.7 79 40.5


User provided reference genes

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