Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08066 Striga asiatica HOM05D046480 ORTHO05D404252 2.9e-70 268.5 136 100.0
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 1.7e-14 83.2 57 71.9
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 2.2e-14 82.8 57 71.9
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 2.2e-14 82.8 57 70.2
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 3.8e-14 82.0 57 70.2
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 5.0e-14 81.6 57 70.2
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 6.5e-14 81.3 72 61.1
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 1.4e-13 80.1 72 59.7
Peaxi162Scf00632g00012 Petunia axillaris HOM05D000104 ORTHO05D003467 1.4e-13 80.1 57 70.2
SGA_v2.0_scaffold20G09081 Striga asiatica HOM05D000104 ORTHO05D003467 1.4e-13 80.1 83 55.4
Solyc06g065730.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 1.9e-13 79.7 57 68.4
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 1.9e-13 79.7 57 68.4
Nitab4.5_0000486g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 2.5e-13 79.3 57 68.4
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 2.5e-13 79.3 57 68.4
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 3.2e-13 79.0 72 59.7
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 4.2e-13 78.6 72 58.3
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 4.2e-13 78.6 57 66.7
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 9.4e-13 77.4 74 58.1
Solyc08g029130.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 9.4e-13 77.4 57 66.7
Sopen08g010020 Solanum pennellii HOM05D000104 ORTHO05D003467 9.4e-13 77.4 57 66.7
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 2.7e-12 75.9 57 64.9
DCAR_003002 Daucus carota HOM05D000104 ORTHO05D003467 3.6e-12 75.5 72 56.9
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 6.1e-12 74.7 57 64.9
MD08G1058800 Malus domestica HOM05D000104 ORTHO05D003467 7.9e-12 74.3 59 67.8
Hund03464 Selenicereus undatus HOM05D000104 ORTHO05D003467 1.8e-11 73.2 59 66.1
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 3.0e-11 72.4 72 52.8
Gohir.A07G031300 Gossypium hirsutum HOM05D000104 ORTHO05D003467 3.9e-11 72.0 59 64.4
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 3.9e-11 72.0 59 64.4
Gorai.001G036900 Gossypium raimondii HOM05D000104 ORTHO05D003467 3.9e-11 72.0 59 64.4
MD15G1037700 Malus domestica HOM05D000104 ORTHO05D003467 3.9e-11 72.0 59 66.1
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 5.1e-11 71.6 74 54.1
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
Gohir.D13G187900 Gossypium hirsutum HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 8.8e-11 70.9 74 54.1
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 8.8e-11 70.9 59 64.4
Atru.chr7.2525 Acer truncatum HOM05D000104 ORTHO05D003467 1.1e-10 70.5 74 54.1
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 1.1e-10 70.5 59 64.4
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 1.5e-10 70.1 59 62.7
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 1.5e-10 70.1 59 64.4
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 2.0e-10 69.7 59 64.4
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 2.6e-10 69.3 59 61.0
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 3.3e-10 68.9 59 62.7
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 3.3e-10 68.9 59 61.0
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 3.3e-10 68.9 59 62.7
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 4.4e-10 68.6 59 62.7
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 4.4e-10 68.6 59 62.7
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 4.4e-10 68.6 59 62.7
Ah.10g035570 Amaranthus hybridus HOM05D000104 ORTHO05D003467 5.7e-10 68.2 59 62.7
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 5.7e-10 68.2 59 62.7
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 5.7e-10 68.2 59 62.7
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 7.4e-10 67.8 74 52.7
Carub.0004s0475 Capsella rubella HOM05D000104 ORTHO05D003467 7.4e-10 67.8 92 44.6
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 7.4e-10 67.8 59 59.3
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 7.4e-10 67.8 59 62.7
Sc09g0010480 Simmondsia chinensis HOM05D000104 ORTHO05D003467 7.4e-10 67.8 59 61.0
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 9.7e-10 67.4 59 61.0
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 9.7e-10 67.4 59 59.3
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 9.7e-10 67.4 59 61.0
AUR62031587 Chenopodium quinoa HOM05D000104 ORTHO05D003467 1.3e-09 67.0 59 62.7
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 1.3e-09 67.0 74 52.7
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 1.3e-09 67.0 74 52.7
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 1.3e-09 67.0 74 52.7
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 1.3e-09 67.0 59 62.7
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 1.7e-09 66.6 59 61.0
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 1.7e-09 66.6 59 62.7
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 1.7e-09 66.6 59 61.0
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 1.7e-09 66.6 74 52.7
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 1.7e-09 66.6 59 59.3
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 1.7e-09 66.6 59 61.0
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 1.7e-09 66.6 74 52.7
Cpa.g.sc127.15 Carica papaya HOM05D000104 ORTHO05D003467 2.2e-09 66.2 59 57.6
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 2.2e-09 66.2 59 62.7
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 2.8e-09 65.9 59 61.0
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 2.8e-09 65.9 59 59.3
Ah.16g104930 Amaranthus hybridus HOM05D000104 ORTHO05D003467 3.7e-09 65.5 59 59.3
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 3.7e-09 65.5 92 43.5
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 3.7e-09 65.5 59 61.0
RcHm_v2.0_Chr3g0455421 Rosa chinensis HOM05D000104 ORTHO05D003467 3.7e-09 65.5 59 57.6
RcHm_v2.0_Chr6g0299661 Rosa chinensis HOM05D000104 ORTHO05D003467 3.7e-09 65.5 59 57.6
Hund19597 Selenicereus undatus HOM05D000104 ORTHO05D003467 3.7e-09 65.5 59 59.3
EL10Ac2g04134 Beta vulgaris HOM05D000104 ORTHO05D003467 4.8e-09 65.1 59 59.3
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 4.8e-09 65.1 60 60.0
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 4.8e-09 65.1 74 50.0
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 4.8e-09 65.1 74 50.0
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 4.8e-09 65.1 74 52.7
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 6.3e-09 64.7 59 57.6
Thhalv10027006m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 6.3e-09 64.7 84 46.4
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 6.3e-09 64.7 59 59.3
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 8.2e-09 64.3 95 42.1
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 8.2e-09 64.3 95 42.1
Sp7g29720 Schrenkiella parvula HOM05D000104 ORTHO05D003467 1.4e-08 63.5 74 48.6
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 1.4e-08 63.5 59 59.3
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 1.4e-08 63.5 59 57.6
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 1.8e-08 63.2 59 55.9
FAN15G1888 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.8e-08 63.2 59 55.9
FAN20G2022 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.8e-08 63.2 59 55.9
FAN27G0005 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.8e-08 63.2 59 55.9
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 1.8e-08 63.2 74 48.6
SGA_v2.0_scaffold17G08068 Striga asiatica HOM05D046480 ORTHO05D405636 1.8e-08 63.2 136 34.6
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 2.4e-08 62.8 74 48.6
Medtr1g013190 Medicago truncatula HOM05D000104 ORTHO05D003467 2.4e-08 62.8 59 57.6
Rhsim07G0163200 Rhododendron simsii HOM05D000104 ORTHO05D003467 2.4e-08 62.8 59 57.6
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 2.4e-08 62.8 92 42.4
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 3.1e-08 62.4 95 41.1
AUR62012463 Chenopodium quinoa HOM05D000104 ORTHO05D003467 3.1e-08 62.4 59 61.0
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 3.1e-08 62.4 59 59.3
Phvul.001G046100 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 3.1e-08 62.4 59 54.2
CARHR116490 Cardamine hirsuta HOM05D000104 ORTHO05D003467 7.0e-08 61.2 95 40.0
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 9.1e-08 60.8 59 55.9
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 1.2e-07 60.5 59 55.9
Lalb_Chr22g0361401 Lupinus albus HOM05D000104 ORTHO05D003467 1.5e-07 60.1 59 54.2
CDE06G2391 Ceratophyllum demersum HOM05D000104 ORTHO05D003467 2.6e-07 59.3 59 54.2
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 3.4e-07 58.9 59 54.2
Carub.0007s0864 Capsella rubella HOM05D000104 ORTHO05D003467 4.5e-07 58.5 83 43.4
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 4.5e-07 58.5 74 45.9
BcaC09g51983 Brassica carinata HOM05D000104 ORTHO05D003467 5.9e-07 58.2 74 47.3
A01p06320 Brassica napus HOM05D000104 ORTHO05D003467 5.9e-07 58.2 74 47.3
C01p06980 Brassica napus HOM05D000104 ORTHO05D003467 5.9e-07 58.2 74 47.3
BolC1t00694H Brassica oleracea HOM05D000104 ORTHO05D003467 5.9e-07 58.2 74 47.3
BraA01t00598Z Brassica rapa HOM05D000104 ORTHO05D003467 5.9e-07 58.2 74 47.3
AL7G20000 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 7.7e-07 57.8 72 48.6
AT4G31900 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 2.9e-06 55.8 83 45.8
VMungo0647G2573 Vigna mungo HOM05D000104 ORTHO05D003467 8.5e-06 54.3 61 49.2


User provided reference genes

Program Settings