Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold135G34849 Striga asiatica HOM05D005583 ORTHO05D006507 2.0e-286 988.4 507 100.0
MSTRG.3182 Avicennia marina HOM05D005583 ORTHO05D006507 8.4e-115 418.3 564 50.4
Migut.H00145 Erythranthe guttata HOM05D005583 ORTHO05D006507 6.2e-102 375.6 534 48.7
SalBow1G3935 Salvia bowleyana HOM05D005583 ORTHO05D006507 2.4e-98 363.6 546 47.3
Lj7A589G58 Lonicera japonica HOM05D005583 ORTHO05D006507 2.6e-92 343.6 526 44.9
Actinidia36072 Actinidia chinensis HOM05D005583 ORTHO05D006507 6.4e-91 339.0 576 41.5
Solyc02g067670.4 Solanum lycopersicum HOM05D005583 ORTHO05D006507 2.4e-90 337.0 514 45.3
Dinv35039 Davidia involucrata HOM05D005583 ORTHO05D006507 5.5e-90 335.9 483 46.2
Peaxi162Scf00368g00115 Petunia axillaris HOM05D005583 ORTHO05D006507 5.5e-90 335.9 593 41.5
PGSC0003DMG400006911 Solanum tuberosum HOM05D005583 ORTHO05D006507 9.3e-90 335.1 523 43.8
Cc07_g02460 Coffea canephora HOM05D005583 ORTHO05D006507 1.2e-89 334.7 604 42.9
Manes.15G181100 Manihot esculenta HOM05D005583 ORTHO05D006507 2.1e-89 334.0 588 41.7
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 4.6e-89 332.8 460 45.7
Hma1.2p1_0697F.1_g204860 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 4.6e-89 332.8 460 45.7
GSVIVG01032508001 Vitis vinifera HOM05D005583 ORTHO05D006507 7.9e-89 332.0 582 41.2
HanXRQChr14g0450181 Helianthus annuus HOM05D005583 ORTHO05D006507 1.8e-88 330.9 518 44.4
ECA238G4583 Erigeron canadensis HOM05D005583 ORTHO05D006507 6.7e-88 328.9 531 44.1
Sopen02g016780 Solanum pennellii HOM05D005583 ORTHO05D006507 2.5e-87 327.0 514 43.8
Nitab4.5_0001709g0090 Nicotiana tabacum HOM05D005583 ORTHO05D006507 3.3e-87 326.6 594 40.9
Nitab4.5_0001727g0030 Nicotiana tabacum HOM05D005583 ORTHO05D006507 8.1e-86 322.0 498 44.0
CAN.G983.2 Capsicum annuum HOM05D005583 ORTHO05D006507 1.1e-85 321.6 535 42.4
MBI15_g24176_MAGBIO Magnolia biondii HOM05D005583 ORTHO05D006507 4.5e-84 316.2 525 43.2
Hund12473 Selenicereus undatus HOM05D005583 ORTHO05D006507 4.5e-84 316.2 506 43.3
Nn4g22860 Nelumbo nucifera HOM05D005583 ORTHO05D006507 5.8e-84 315.8 510 44.3
CiPaw.04G023600 Carya illinoinensis HOM05D005583 ORTHO05D006507 1.3e-83 314.7 486 44.2
Ciclev10014025m.g Citrus clementina HOM05D005583 ORTHO05D006507 1.3e-83 314.7 484 43.8
Lsat_1_v5_gn_2_92580 Lactuca sativa HOM05D005583 ORTHO05D006507 2.9e-83 313.5 446 47.1
Haze_14649 Corylus avellana HOM05D005583 ORTHO05D006507 4.9e-83 312.8 386 50.0
Aqoxy3G03052 Aquilegia oxysepala HOM05D005583 ORTHO05D006507 8.4e-83 312.0 483 43.7
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea HOM05D005583 ORTHO05D006507 1.4e-82 311.2 607 38.9
Gohir.D07G225712 Gossypium hirsutum HOM05D005583 ORTHO05D006507 1.9e-82 310.8 468 45.3
Gorai.001G260400 Gossypium raimondii HOM05D005583 ORTHO05D006507 2.5e-82 310.5 468 45.1
QL02p077165 Quercus lobata HOM05D005583 ORTHO05D006507 2.5e-82 310.5 544 40.4
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea HOM05D005583 ORTHO05D006507 4.2e-82 309.7 610 38.9
ClCG10G014410 Citrullus lanatus HOM05D005583 ORTHO05D006507 4.2e-82 309.7 463 44.3
FvH4_6g50430 Fragaria vesca HOM05D005583 ORTHO05D006507 4.2e-82 309.7 476 46.0
PSO063G3250 Papaver somniferum HOM05D005583 ORTHO05D006507 7.1e-82 308.9 450 44.9
RcHm_v2.0_Chr2g0170851 Rosa chinensis HOM05D005583 ORTHO05D006507 7.1e-82 308.9 527 42.1
Duzib147G0322 Durio zibethinus HOM05D005583 ORTHO05D006507 1.6e-81 307.8 505 41.8
FAN14G4719 Fragaria x ananassa HOM05D005583 ORTHO05D006507 2.1e-81 307.4 476 45.8
TAR629G0978 Trochodendron aralioides HOM05D005583 ORTHO05D006507 2.1e-81 307.4 497 44.5
CSS0039879 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 2.7e-81 307.0 488 44.3
MELO3C009939.2 Cucumis melo HOM05D005583 ORTHO05D006507 2.7e-81 307.0 480 43.8
Cfa007452 Carpinus fangiana HOM05D005583 ORTHO05D006507 3.5e-81 306.6 589 40.4
Glyma.01G077200 Glycine max HOM05D005583 ORTHO05D006507 1.3e-80 304.7 491 44.2
CsaV3_3G042180 Cucumis sativus L. HOM05D005583 ORTHO05D006507 3.0e-80 303.5 493 42.6
Eucgr.I01829 Eucalyptus grandis HOM05D005583 ORTHO05D006507 6.7e-80 302.4 493 43.2
Potri.017G070500 Populus trichocarpa HOM05D005583 ORTHO05D006507 8.7e-80 302.0 487 42.7
Rhsim10G0025300 Rhododendron simsii HOM05D005583 ORTHO05D006507 8.7e-80 302.0 643 37.8
COL.COLO4_04368 Corchorus olitorius HOM05D005583 ORTHO05D006507 1.1e-79 301.6 492 43.9
BolC7t44234H Brassica oleracea HOM05D005583 ORTHO05D006507 1.9e-79 300.8 530 40.9
TPR.G30816 Trifolium pratense HOM05D005583 ORTHO05D006507 1.9e-79 300.8 589 39.2
VMungo1383G3393 Vigna mungo HOM05D005583 ORTHO05D006507 1.9e-79 300.8 607 39.7
unitig_21.g20499 Utricularia gibba HOM05D005583 ORTHO05D006507 2.5e-79 300.4 519 43.7
TWI56G1339 Tripterygium wilfordii HOM05D005583 ORTHO05D006507 3.3e-79 300.1 524 42.2
A06p40700 Brassica napus HOM05D005583 ORTHO05D006507 9.6e-79 298.5 535 40.4
PGR142G3038 Punica granatum HOM05D005583 ORTHO05D006507 3.7e-78 296.6 472 44.1
CSS0006408 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 4.8e-78 296.2 501 41.7
BraA06t26991Z Brassica rapa HOM05D005583 ORTHO05D006507 6.3e-78 295.8 538 40.5
THA.LOC104825294 Tarenaya hassleriana HOM05D005583 ORTHO05D006507 8.2e-78 295.4 577 38.3
CANSAT64G0115 Cannabis sativa HOM05D005583 ORTHO05D006507 1.1e-77 295.0 582 39.0
Carub.0005s0655 Capsella rubella HOM05D005583 ORTHO05D006507 1.1e-77 295.0 519 41.0
Sc06g0001630 Simmondsia chinensis HOM05D005583 ORTHO05D006507 1.4e-77 294.7 554 40.6
Prupe.3G281300 Prunus persica HOM05D005583 ORTHO05D006507 4.1e-77 293.1 483 42.0
Aa31LG2G4780 Aethionema arabicum HOM05D005583 ORTHO05D006507 6.9e-77 292.4 529 39.7
BcaC06g30938 Brassica carinata HOM05D005583 ORTHO05D006507 1.5e-76 291.2 538 40.1
Gohir.A07G218700 Gossypium hirsutum HOM05D005583 ORTHO05D006507 2.0e-76 290.8 372 49.7
Lj1g0019005 Lotus japonicus HOM05D005583 ORTHO05D006507 2.0e-76 290.8 587 39.2
DCAR_011222 Daucus carota HOM05D005583 ORTHO05D006507 2.6e-76 290.4 478 42.9
C07p37240 Brassica napus HOM05D005583 ORTHO05D006507 5.9e-76 289.3 226 64.6
MD17G1038000 Malus domestica HOM05D005583 ORTHO05D006507 5.9e-76 289.3 479 41.5
Sp2g17030 Schrenkiella parvula HOM05D005583 ORTHO05D006507 7.6e-76 288.9 528 39.4
Sed0016811 Sechium edule HOM05D005583 ORTHO05D006507 1.0e-75 288.5 505 40.6
Ca_14482_v3 Cicer arietinum L. HOM05D005583 ORTHO05D006507 1.7e-75 287.7 591 38.1
FAN09G0355 Fragaria x ananassa HOM05D005583 ORTHO05D006507 2.2e-75 287.3 234 65.4
PSO832G0708 Papaver somniferum HOM05D005583 ORTHO05D006507 5.0e-75 286.2 538 40.0
Zm00001eb007570 Zea mays HOM05D005583 ORTHO05D006507 5.0e-75 286.2 549 38.8
Lalb_Chr10g0093441 Lupinus albus HOM05D005583 ORTHO05D006507 6.5e-75 285.8 506 39.9
Thhalv10003517m.g Eutrema salsugineum HOM05D005583 ORTHO05D006507 5.5e-74 282.7 530 39.4
BcaC06g33760 Brassica carinata HOM05D005583 ORTHO05D006507 9.3e-74 282.0 530 40.0
Os03g0205400 Oryza sativa ssp. japonica HOM05D005583 ORTHO05D006507 1.2e-73 281.6 342 47.7
Sabra17G0050500 Salix brachista HOM05D005583 ORTHO05D006507 2.1e-73 280.8 399 46.6
AL5G17540 Arabidopsis lyrata HOM05D005583 ORTHO05D006507 3.5e-73 280.0 530 38.7
Medtr7g034405 Medicago truncatula HOM05D005583 ORTHO05D006507 7.9e-73 278.9 595 37.6
EL10Ac1g00599 Beta vulgaris HOM05D005583 ORTHO05D006507 1.0e-72 278.5 485 42.5
AUR62035940 Chenopodium quinoa HOM05D005583 ORTHO05D006507 3.9e-72 276.6 484 43.2
ATR0629G036 Amborella trichopoda HOM05D005583 ORTHO05D006507 5.1e-72 276.2 574 37.1
AT3G28030 Arabidopsis thaliana HOM05D005583 ORTHO05D006507 5.1e-72 276.2 526 37.8
Psat3g171760 Pisum sativum HOM05D005583 ORTHO05D006507 7.4e-71 272.3 466 40.3
CARHR149650 Cardamine hirsuta HOM05D005583 ORTHO05D006507 4.8e-70 269.6 530 38.9
CDE10G1103 Ceratophyllum demersum HOM05D005583 ORTHO05D006507 8.5e-67 258.8 511 38.2
vmacro05807 Vaccinium macrocarpon HOM05D005583 ORTHO05D006507 2.7e-65 253.8 604 35.8
SEGI_39705 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 7.4e-63 245.7 503 37.6
AagrBONN_evm.TU.Sc2ySwM_228.1548 Anthoceros agrestis HOM05D005583 ORTHO05D006507 2.4e-61 240.7 230 56.5
Ah.10g033560 Amaranthus hybridus HOM05D005583 ORTHO05D006507 4.2e-58 229.9 475 39.4
Mapoly0177s0011 Marchantia polymorpha HOM05D005583 ORTHO05D006507 1.2e-57 228.4 247 49.4
Cpa.g.sc140.34 Carica papaya HOM05D005583 ORTHO05D006507 3.6e-57 226.9 317 44.2
CBR_g74695 Chara braunii HOM05D005583 ORTHO05D006507 4.7e-57 226.5 207 57.5
Pp3c11_24040 Physcomitrium patens HOM05D005583 ORTHO05D006507 1.9e-50 204.5 571 32.0
Atru.chr6.2177 Acer truncatum HOM05D005583 ORTHO05D006507 3.2e-50 203.8 390 40.5
C07p37280 Brassica napus HOM05D005583 ORTHO05D006507 4.0e-48 196.8 444 36.0
Cre10.g429050 Chlamydomonas reinhardtii HOM05D005583 ORTHO05D006507 4.4e-47 193.4 203 47.3
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 3.6e-33 147.1 128 60.2
MCO01G030 Micromonas commoda HOM05D005583 ORTHO05D006507 5.2e-32 143.3 214 40.2
PGR142G0990 Punica granatum HOM05D005583 ORTHO05D006507 5.0e-27 126.7 82 72.0
PRCOL_00006730 Prasinoderma coloniale HOM05D005583 ORTHO05D006507 5.2e-24 116.7 197 35.5
Thecc.04G006200 Theobroma cacao HOM05D005583 ORTHO05D006507 1.4e-21 108.6 127 49.6
Phvul.008G152600 Phaseolus vulgaris HOM05D005583 ORTHO05D006507 1.7e-19 101.7 118 50.8
Cfa026862 Carpinus fangiana HOM05D005583 ORTHO05D006507 3.6e-17 94.0 179 33.5
Duzib264G0905 Durio zibethinus HOM05D005583 ORTHO05D006507 2.3e-08 64.7 114 41.2
MELO3C028469.2 Cucumis melo HOM05D005583 ORTHO05D044829 9.8e-07 59.3 32 78.1
MELO3C028886.2 Cucumis melo HOM05D005583 ORTHO05D006507 2.2e-06 58.2 54 50.0
SHI22363 Sapria himalayana HOM05D005583 ORTHO05D006507 3.7e-06 57.4 246 28.5


User provided reference genes

Program Settings