Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 0.0e+00 1251.9 632 100.0
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.1e-305 1052.7 632 83.7
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 6.4e-298 1026.9 632 82.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 4.3e-286 987.6 632 77.5
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 4.2e-281 971.1 632 75.6
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 9.3e-281 969.9 632 75.5
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.3e-279 965.3 632 75.5
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 4.0e-276 954.5 632 73.7
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.2e-275 953.0 632 74.1
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 5.5e-273 944.1 632 73.4
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 6.7e-271 937.2 665 70.2
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 2.4e-268 928.7 640 72.2
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.0e-267 925.6 632 72.9
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 8.4e-266 920.2 632 71.7
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.4e-265 919.5 632 72.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 1.9e-265 919.1 632 70.9
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 9.3e-265 916.8 632 72.2
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.2e-264 916.4 632 71.8
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.7e-264 915.2 632 71.2
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 4.6e-264 914.4 632 71.4
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 2.3e-263 912.1 632 70.6
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 3.3e-262 908.3 633 70.6
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.3e-261 906.4 720 64.9
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.6e-261 906.0 632 70.3
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 2.8e-261 905.2 632 72.2
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 1.2e-259 899.8 607 73.1
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.0e-259 899.0 632 70.6
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.6e-259 898.7 632 70.7
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 4.5e-259 897.9 632 69.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 7.6e-259 897.1 631 71.5
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 3.2e-257 891.7 632 70.4
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.7e-256 888.6 633 69.0
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.0e-255 886.7 633 68.9
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.9e-254 882.5 632 69.8
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 9.7e-254 880.2 631 68.6
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.2e-253 879.0 632 68.7
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.8e-253 878.6 629 68.8
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.1e-252 876.7 632 69.1
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-252 876.3 632 69.1
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.4e-252 876.3 632 68.4
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 3.4e-251 871.7 612 69.8
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.4e-249 866.3 637 67.7
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.4e-244 849.7 629 66.8
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 3.8e-242 841.6 633 65.4
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.6e-240 836.3 633 65.6
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 4.7e-240 834.7 630 64.4
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 6.1e-240 834.3 632 64.4
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 6.1e-240 834.3 644 66.9
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.1e-238 830.1 632 64.7
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 1.5e-238 829.7 634 64.4
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 5.7e-238 827.8 632 66.9
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 9.7e-238 827.0 632 63.8
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.7e-237 826.2 630 65.1
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 2.2e-237 825.9 593 69.5
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.7e-237 825.1 632 63.9
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 3.1e-236 822.0 633 66.0
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 3.5e-235 818.5 632 64.4
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 4.5e-235 818.1 632 64.1
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 8.5e-234 813.9 633 64.8
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.9e-233 812.8 633 64.1
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 5.5e-233 811.2 632 63.8
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 5.5e-233 811.2 632 63.8
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 6.7e-231 804.3 642 64.3
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.8e-229 798.9 653 62.8
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-228 796.6 632 64.7
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.1e-228 795.4 644 63.8
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 2.2e-226 789.3 635 62.4
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 5.0e-226 788.1 497 77.3
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.2e-224 783.5 637 63.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.8e-223 779.6 649 62.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.2e-222 776.9 588 67.7
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 2.2e-221 772.7 635 61.7
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 9.1e-220 767.3 632 61.6
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 3.5e-219 765.4 618 62.6
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.3e-215 752.7 743 55.6
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 7.5e-214 747.7 632 62.8
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 3.3e-209 732.3 595 64.4
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.2e-207 724.9 632 60.1
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.2e-207 724.9 641 61.3
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.2e-207 724.9 567 68.3
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 6.8e-191 671.4 439 77.2
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 3.1e-183 646.0 657 55.6
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 6.6e-178 628.2 629 50.9
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 4.6e-163 578.9 439 65.4
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 8.7e-162 574.7 569 50.8
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 3.3e-161 572.8 569 51.0
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.5e-145 520.0 441 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 2.6e-142 510.0 631 44.2
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.1e-137 494.6 628 43.8
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 3.4e-134 483.0 631 42.2
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 3.8e-133 479.6 544 49.6
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 1.7e-128 464.2 309 73.8
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.5e-126 457.6 632 43.5
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 5.0e-125 452.6 293 76.8
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.7e-117 427.6 360 61.9
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 3.7e-112 409.8 295 68.5
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 3.5e-110 403.3 275 73.8
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 4.2e-108 396.4 291 65.3
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 2.0e-86 324.3 232 68.5
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 8.6e-85 318.9 247 65.2
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 3.3e-84 317.0 252 64.7
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.1e-83 314.3 245 62.4
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 1.4e-82 311.6 228 68.4
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 1.9e-79 301.2 244 65.2
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 3.6e-59 233.8 713 29.7
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 2.0e-57 228.0 156 66.7
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 3.8e-56 223.8 187 63.1
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 5.4e-55 219.9 170 66.5
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-50 205.3 175 60.6
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.9e-47 194.9 135 72.6
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 4.2e-47 193.7 188 59.0
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 6.2e-43 179.9 590 27.3
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 4.2e-39 167.2 131 63.4
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 4.8e-35 153.7 118 61.0
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.1e-30 138.3 106 62.3
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 2.7e-30 137.9 707 24.3
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.2e-25 122.5 104 57.7
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 3.7e-19 100.9 73 60.3
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 3.1e-18 97.8 114 49.1
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 4.1e-18 97.4 131 40.5
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 6.9e-18 96.7 57 77.2
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.5e-17 95.5 66 66.7
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 1.0e-13 82.8 71 62.0
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.3e-13 81.6 78 51.3
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.0e-12 78.6 46 80.4
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.3e-11 75.9 48 72.9
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 2.2e-11 75.1 75 54.7
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 5.3e-10 70.5 68 51.5


User provided reference genes

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