Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 8.2e-94 347.1 175 100.0
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.2e-36 157.1 116 71.6
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.6e-36 156.8 97 82.5
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 4.6e-36 155.2 80 96.2
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 4.6e-36 155.2 80 95.0
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 1.7e-35 153.3 80 95.0
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 2.3e-35 152.9 80 95.0
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.3e-35 152.9 80 92.5
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 2.9e-35 152.5 96 81.2
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 2.9e-35 152.5 80 93.8
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 93.8
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 93.8
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 95.0
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 93.8
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 92.5
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 92.5
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 3.9e-35 152.1 80 95.0
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 5.0e-35 151.8 79 94.9
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 6.6e-35 151.4 80 92.5
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 6.6e-35 151.4 80 92.5
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 6.6e-35 151.4 80 92.5
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 6.6e-35 151.4 96 81.2
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 6.6e-35 151.4 80 93.8
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 6.6e-35 151.4 80 92.5
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 8.6e-35 151.0 80 93.8
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 8.6e-35 151.0 80 92.5
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 8.6e-35 151.0 80 92.5
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 8.6e-35 151.0 80 92.5
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.1e-34 150.6 80 93.8
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 1.1e-34 150.6 80 92.5
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 91.2
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 92.5
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 90.0
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 92.5
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 93.8
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.5e-34 150.2 80 93.8
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.9e-34 149.8 80 91.2
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.9e-34 149.8 80 92.5
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 1.9e-34 149.8 80 91.2
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.9e-34 149.8 80 92.5
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 91.2
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 90.0
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 90.0
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 90.0
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 91.2
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 91.2
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 91.2
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 2.5e-34 149.4 80 91.2
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 3.3e-34 149.1 78 93.6
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 3.3e-34 149.1 78 93.6
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 3.3e-34 149.1 78 93.6
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 3.3e-34 149.1 78 93.6
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 3.3e-34 149.1 78 93.6
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 3.3e-34 149.1 80 92.5
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 3.3e-34 149.1 80 91.2
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 3.3e-34 149.1 80 91.2
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 3.3e-34 149.1 80 90.0
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 4.3e-34 148.7 96 79.2
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 4.3e-34 148.7 79 92.4
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 4.3e-34 148.7 79 92.4
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 4.3e-34 148.7 79 92.4
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 4.3e-34 148.7 78 92.3
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 5.6e-34 148.3 80 91.2
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 9.5e-34 147.5 79 91.1
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 9.5e-34 147.5 80 91.2
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 9.5e-34 147.5 80 91.2
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.2e-33 147.1 80 91.2
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 1.2e-33 147.1 96 75.0
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 1.6e-33 146.7 80 88.8
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.6e-33 146.7 80 90.0
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 2.1e-33 146.4 80 88.8
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 2.1e-33 146.4 80 90.0
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 2.8e-33 146.0 80 88.8
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 2.8e-33 146.0 80 88.8
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 2.8e-33 146.0 78 92.3
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.8e-33 146.0 79 91.1
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 3.6e-33 145.6 80 88.8
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 3.6e-33 145.6 78 91.0
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 8.0e-33 144.4 78 91.0
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 8.0e-33 144.4 78 89.7
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 1.4e-32 143.7 77 90.9
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 2.3e-32 142.9 77 90.9
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 2.3e-32 142.9 77 89.6
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 2.3e-32 142.9 78 91.0
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 3.1e-32 142.5 77 89.6
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 3.1e-32 142.5 96 76.0
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 6.8e-32 141.4 77 89.6
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 1.2e-31 140.6 77 88.3
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 2.0e-31 139.8 73 94.5
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 2.6e-31 139.4 77 87.0
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 2.6e-31 139.4 77 87.0
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 3.4e-31 139.0 77 87.0
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 5.8e-31 138.3 77 85.7
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 7.5e-31 137.9 80 81.2
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 9.8e-31 137.5 77 87.0
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 1.3e-30 137.1 90 77.8
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 1.7e-30 136.7 119 64.7
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.2e-30 136.3 87 79.3
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 4.9e-30 135.2 70 94.3
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 1.1e-29 134.0 75 86.7
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-29 133.7 70 92.9
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 1.9e-29 133.3 70 91.4
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 2.4e-29 132.9 77 77.9
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.2e-28 130.6 85 76.5
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 7.8e-28 127.9 70 87.1
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 3.9e-27 125.6 78 75.6
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 8.6e-27 124.4 85 72.9
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 4.3e-26 122.1 63 90.5
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.2e-25 120.6 66 84.8
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 4.7e-25 118.6 89 66.3
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 1.1e-24 117.5 89 66.3
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 1.5e-23 113.6 77 74.0
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-21 107.1 57 87.7
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 1.1e-18 97.4 50 94.0
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 6.2e-17 91.7 66 71.2
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 7.6e-15 84.7 96 53.1
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 1.3e-11 73.9 117 39.3
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.1e-10 70.9 89 48.3
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.9e-10 70.1 35 85.7
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 4.4e-07 58.9 34 76.5


User provided reference genes

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