Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 4.9e-76 287.7 147 100.0
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 2.7e-50 202.2 135 67.4
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 3.6e-50 201.8 136 66.9
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 3.6e-50 201.8 136 69.9
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 4.7e-50 201.4 136 69.9
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 7.9e-50 200.7 138 66.7
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 7.9e-50 200.7 136 69.9
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 1.0e-49 200.3 138 66.7
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 1.4e-49 199.9 142 64.8
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 1.8e-49 199.5 135 65.9
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 1.8e-49 199.5 138 66.7
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 2.3e-49 199.1 138 65.9
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 2.3e-49 199.1 138 65.9
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 3.0e-49 198.7 138 65.9
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 3.9e-49 198.4 137 67.2
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 3.9e-49 198.4 138 65.2
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 5.1e-49 198.0 138 65.9
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 5.1e-49 198.0 136 66.9
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 5.1e-49 198.0 138 66.7
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 8.8e-49 197.2 138 65.2
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 8.8e-49 197.2 138 65.2
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 1.5e-48 196.4 136 67.6
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 2.0e-48 196.1 136 67.6
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.0e-48 196.1 138 64.5
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 2.0e-48 196.1 138 68.1
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 2.0e-48 196.1 140 63.6
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 2.6e-48 195.7 137 66.4
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 2.6e-48 195.7 138 63.8
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.6e-48 195.7 138 65.2
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.6e-48 195.7 138 65.2
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 3.3e-48 195.3 134 67.2
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 5.7e-48 194.5 138 64.5
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 7.4e-48 194.1 136 65.4
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 7.4e-48 194.1 147 61.9
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 7.4e-48 194.1 136 65.4
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.4e-48 194.1 138 64.5
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 7.4e-48 194.1 136 66.2
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 1.3e-47 193.4 137 67.2
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 1.7e-47 193.0 136 64.7
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.8e-47 192.2 138 62.3
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 2.8e-47 192.2 136 64.7
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 3.7e-47 191.8 137 65.7
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 3.7e-47 191.8 140 66.4
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 6.3e-47 191.0 134 65.7
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 6.3e-47 191.0 136 65.4
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 6.3e-47 191.0 136 63.2
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 8.2e-47 190.7 138 60.9
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.1e-46 190.3 136 63.2
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.1e-46 190.3 136 62.5
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 1.1e-46 190.3 136 65.4
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 1.4e-46 189.9 134 64.9
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.4e-46 189.9 138 61.6
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 1.4e-46 189.9 136 65.4
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 1.4e-46 189.9 136 63.2
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.8e-46 189.5 134 65.7
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 1.8e-46 189.5 136 64.0
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 1.8e-46 189.5 136 65.4
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 2.4e-46 189.1 145 60.0
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 3.1e-46 188.7 138 63.8
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 4.1e-46 188.3 136 64.0
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 4.1e-46 188.3 136 65.4
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 4.1e-46 188.3 136 63.2
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 5.3e-46 188.0 136 63.2
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 5.3e-46 188.0 138 63.0
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 5.3e-46 188.0 138 63.0
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 7.0e-46 187.6 138 62.3
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 7.0e-46 187.6 136 62.5
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 9.1e-46 187.2 136 64.7
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 1.2e-45 186.8 136 62.5
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 1.2e-45 186.8 136 62.5
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 1.2e-45 186.8 134 64.2
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 1.2e-45 186.8 138 62.3
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 1.5e-45 186.4 137 60.6
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.5e-45 186.4 131 64.1
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 2.0e-45 186.0 128 68.0
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 2.0e-45 186.0 138 63.0
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 3.4e-45 185.3 136 61.8
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 5.9e-45 184.5 134 63.4
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 2.9e-44 182.2 138 63.8
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 6.5e-44 181.0 138 62.3
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 6.5e-44 181.0 138 63.0
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 6.5e-44 181.0 138 63.8
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 6.5e-44 181.0 138 63.0
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 6.5e-44 181.0 138 60.1
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 1.1e-43 180.3 138 62.3
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 1.1e-43 180.3 140 59.3
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 1.9e-43 179.5 138 63.0
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 3.2e-43 178.7 138 63.0
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 3.6e-42 175.3 126 69.0
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 4.7e-42 174.9 127 66.1
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 4.7e-42 174.9 138 62.3
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 6.1e-42 174.5 138 60.9
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 1.4e-41 173.3 138 58.0
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 1.4e-41 173.3 150 58.0
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 2.3e-41 172.6 136 61.0
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 2.3e-41 172.6 136 61.0
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 8.8e-41 170.6 138 60.1
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 8.8e-41 170.6 138 60.1
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 1.5e-40 169.9 133 60.9
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 7.4e-40 167.5 163 52.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 7.4e-40 167.5 127 62.2
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 2.2e-39 166.0 128 63.3
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 7.0e-38 161.0 127 61.4
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 4.5e-37 158.3 108 69.4
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 3.8e-36 155.2 106 69.8
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 8.5e-36 154.1 103 68.9
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 1.6e-34 149.8 106 67.9
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 4.8e-31 138.3 134 53.7
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 9.1e-30 134.0 137 50.4
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 2.5e-27 125.9 92 63.0
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 5.5e-27 124.8 136 47.1
ATR0068G025 Amborella trichopoda HOM05D005149 ORTHO05D006251 9.4e-27 124.0 86 69.8
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 1.3e-23 113.6 151 43.7
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 1.7e-23 113.2 108 54.6
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 1.8e-22 109.8 87 59.8
COL.COLO4_28905 Corchorus olitorius HOM05D005149 ORTHO05D006251 7.0e-22 107.8 78 62.8
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 1.3e-20 103.6 134 44.8
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 3.8e-20 102.1 63 77.8
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 1.6e-18 96.7 136 37.5
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 8.0e-18 94.4 60 66.7
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 1.4e-17 93.6 78 53.8
arahy.Tifrunner.gnm1.ann1.UR2VUR Arachis hypogaea HOM05D005149 ORTHO05D006251 6.8e-17 91.3 79 55.7
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 1.2e-16 90.5 85 48.2
Cfa024879 Carpinus fangiana HOM05D005149 ORTHO05D006251 2.4e-14 82.8 137 35.0
BolC2t06178H Brassica oleracea HOM05D005149 ORTHO05D006251 8.6e-12 74.3 69 59.4
MBI14_g16397_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 4.3e-11 72.0 49 65.3
AagrBONN_evm.TU.Sc2ySwM_117.426 Anthoceros agrestis HOM05D005149 ORTHO05D006251 6.1e-10 68.2 95 46.3
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis HOM05D005149 ORTHO05D006251 6.1e-10 68.2 95 46.3
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 1.5e-08 63.5 36 66.7
BcaC03g13138 Brassica carinata HOM05D005149 ORTHO05D006251 2.0e-08 63.2 81 44.4
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-08 62.8 67 46.3
arahy.Tifrunner.gnm1.ann1.638LQB Arachis hypogaea HOM05D000561 ORTHO05D000514 5.4e-06 55.1 37 67.6


User provided reference genes

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