Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08899 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 7.6e-247 856.7 418 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 8.3e-169 597.4 385 72.2
Pp3c5_22230 Physcomitrium patens HOM05D005460 ORTHO05D008059 1.2e-164 583.6 385 70.6
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 3.5e-159 565.5 386 68.1
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 1.3e-158 563.5 386 66.8
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 3.3e-157 558.9 386 66.6
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 8.0e-156 554.3 386 66.6
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 8.0e-156 554.3 383 66.8
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 4.0e-155 552.0 389 66.1
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 6.8e-155 551.2 420 61.0
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.5e-154 550.1 386 66.1
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 1.7e-153 546.6 418 61.2
Hma1.2p1_2037F.1_g311990 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 3.7e-153 545.4 386 65.3
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 1.4e-152 543.5 419 60.9
Oeu005512.2 Olea europaea HOM05D005460 ORTHO05D008059 1.2e-151 540.4 386 66.3
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 2.7e-151 539.3 420 60.7
CSS0043223 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 3.5e-151 538.9 386 65.0
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 4.6e-151 538.5 423 61.9
DCAR_011574 Daucus carota HOM05D005460 ORTHO05D008059 7.8e-151 537.7 386 64.2
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 3.0e-150 535.8 420 60.2
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 1.9e-149 533.1 387 64.9
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 1.9e-149 533.1 386 64.5
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 9.5e-149 530.8 386 64.5
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.6e-148 530.0 420 60.2
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.6e-148 530.0 420 60.2
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 2.8e-148 529.3 386 63.0
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 3.6e-148 528.9 422 60.0
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 4.7e-148 528.5 386 63.5
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 6.2e-148 528.1 387 62.0
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 8.1e-148 527.7 420 59.5
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 8.1e-148 527.7 386 63.2
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 1.8e-147 526.6 386 63.0
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 4.0e-147 525.4 420 58.8
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 4.0e-147 525.4 386 62.7
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 8.9e-147 524.2 391 63.7
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 1.2e-146 523.9 423 59.3
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 3.4e-146 522.3 386 63.5
SMO203G0199 Selaginella moellendorffii HOM05D005460 ORTHO05D008059 5.8e-146 521.5 388 62.4
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 5.8e-146 521.5 386 63.2
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 9.8e-146 520.8 389 62.0
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 2.2e-145 519.6 386 62.2
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 2.2e-145 519.6 386 61.9
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 2.9e-145 519.2 423 58.9
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 1.4e-144 516.9 386 62.4
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 1.9e-144 516.5 386 61.7
CBR_g50975 Chara braunii HOM05D005460 ORTHO05D008059 3.2e-144 515.8 388 61.3
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 2.7e-143 512.7 386 61.4
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 3.5e-143 512.3 386 61.4
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 7.8e-143 511.1 395 61.3
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 1.7e-142 510.0 420 57.6
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 5.1e-142 508.4 419 58.5
Manes.06G081200 Manihot esculenta HOM05D005460 ORTHO05D008059 1.1e-141 507.3 389 61.7
PGSC0003DMG400024525 Solanum tuberosum HOM05D005460 ORTHO05D008059 2.5e-141 506.1 386 61.4
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 4.3e-141 505.4 386 61.1
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 7.3e-141 504.6 386 61.1
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 2.8e-140 502.7 386 61.1
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 2.8e-140 502.7 419 57.5
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 3.6e-140 502.3 386 60.9
Lalb_Chr11g0071861 Lupinus albus HOM05D005460 ORTHO05D008059 4.7e-140 501.9 419 56.1
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 1.8e-139 500.0 386 60.6
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 6.8e-139 498.0 419 56.8
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 8.9e-139 497.7 386 58.8
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 5.8e-138 495.0 393 60.1
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 9.9e-138 494.2 386 59.1
RcHm_v2.0_Chr7g0183711 Rosa chinensis HOM05D005460 ORTHO05D008059 4.1e-136 488.8 388 60.1
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 9.2e-136 487.6 388 61.1
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 3.9e-134 482.3 389 57.3
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 5.1e-134 481.9 386 58.0
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 6.6e-134 481.5 432 55.1
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 8.6e-134 481.1 386 56.7
Sp6g34850 Schrenkiella parvula HOM05D005460 ORTHO05D008059 1.9e-133 479.9 386 57.0
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 7.3e-133 478.0 388 60.1
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 2.1e-132 476.5 407 58.2
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 6.2e-132 474.9 386 58.3
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 3.1e-131 472.6 386 56.0
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 5.2e-131 471.9 389 57.6
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 4.4e-130 468.8 386 56.2
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 1.3e-129 467.2 386 57.0
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 8.4e-129 464.5 386 56.2
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 1.4e-128 463.8 386 56.2
CARHR205080 Cardamine hirsuta HOM05D005460 ORTHO05D008059 3.2e-128 462.6 386 55.4
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 5.4e-128 461.8 386 56.2
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 1.2e-127 460.7 386 55.7
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 3.5e-127 459.1 386 56.5
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 1.5e-125 453.8 385 56.9
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 3.3e-125 452.6 388 55.4
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 6.2e-124 448.4 386 56.2
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 5.3e-123 445.3 386 56.2
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 6.9e-123 444.9 386 56.0
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 1.4e-120 437.2 420 52.9
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 1.9e-120 436.8 306 66.7
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 7.1e-112 408.3 420 50.0
SHI17428 Sapria himalayana HOM05D005460 ORTHO05D008059 2.7e-111 406.4 340 58.5
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 3.9e-110 402.5 386 52.1
Prupe.5G209300 Prunus persica HOM05D005460 ORTHO05D008059 1.0e-102 377.9 424 46.5
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 5.0e-97 359.0 777 31.1
Hma1.2p1_3034F.1_g331890 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 1.8e-94 350.5 250 66.0
MCO09G659 Micromonas commoda HOM05D005460 ORTHO05D008059 1.9e-93 347.1 396 46.5
Ca_02784_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 5.0e-89 332.4 263 61.6
Nitab4.5_0002467g0140 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.8e-83 313.9 231 61.5
Cre03.g187700 Chlamydomonas reinhardtii HOM05D005460 ORTHO05D008059 1.6e-79 300.8 587 32.7
vmacro23112 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 1.6e-79 300.8 780 28.5
PRCOL_00000536 Prasinoderma coloniale HOM05D005460 ORTHO05D008059 9.7e-69 265.0 451 37.5
FAN13G2142 Fragaria x ananassa HOM05D005460 ORTHO05D008059 3.7e-68 263.1 402 39.8
Pp3s405_10 Physcomitrium patens HOM05D005460 ORTHO05D008059 3.8e-49 199.9 391 31.7
Potri.012G063201 Populus trichocarpa HOM05D005460 ORTHO05D008059 1.1e-48 198.4 150 62.0
AagrBONN_evm.TU.Sc2ySwM_344.4214 Anthoceros agrestis HOM05D005460 ORTHO05D008059 3.3e-48 196.8 385 30.6
Pp3c7_15450 Physcomitrium patens HOM05D005460 ORTHO05D008059 6.8e-46 189.1 386 31.9
Pp3c7_15456 Physcomitrium patens HOM05D005460 ORTHO05D008059 6.8e-46 189.1 386 31.9
MCO07G109 Micromonas commoda HOM05D005460 ORTHO05D008059 6.2e-39 166.0 408 29.2
Cfa022214 Carpinus fangiana HOM05D005460 ORTHO05D124255 1.6e-26 124.8 231 32.0
Ca_02785_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 5.6e-24 116.3 94 57.4
Psat0s3496g0160 Pisum sativum HOM05D001876 ORTHO05D002002 1.9e-16 91.3 97 45.4
Lsat_1_v5_gn_1_69000 Lactuca sativa HOM05D005460 ORTHO05D048358 1.6e-10 71.6 80 47.5
Actinidia10444 Actinidia chinensis HOM05D005460 ORTHO05D056868 5.3e-06 56.6 32 65.6


User provided reference genes

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