Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07350 Sequoiadendron giganteum HOM05D001045 ORTHO05D004836 9.3e-112 406.8 188 100.0
ATR0680G066 Amborella trichopoda HOM05D001045 ORTHO05D004836 7.0e-51 204.5 111 80.2
CANSAT80G0692 Cannabis sativa HOM05D001045 ORTHO05D004836 1.2e-50 203.8 151 63.6
Sp2g26510 Schrenkiella parvula HOM05D001045 ORTHO05D004836 1.2e-50 203.8 139 67.6
arahy.Tifrunner.gnm1.ann1.XN7UED Arachis hypogaea HOM05D001045 ORTHO05D004836 1.6e-50 203.4 111 77.5
AT5G63420 Arabidopsis thaliana HOM05D001045 ORTHO05D004836 2.0e-50 203.0 137 68.6
arahy.Tifrunner.gnm1.ann1.B3AG7P Arachis hypogaea HOM05D001045 ORTHO05D004836 3.5e-50 202.2 111 76.6
MBI16_g26173_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 3.5e-50 202.2 111 78.4
Psat4g062560 Pisum sativum HOM05D001045 ORTHO05D004836 3.5e-50 202.2 111 77.5
THA.LOC104798948 Tarenaya hassleriana HOM05D001045 ORTHO05D004836 3.5e-50 202.2 105 81.9
MBI11_g06773_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 4.6e-50 201.8 111 78.4
Atru.chr9.1079 Acer truncatum HOM05D001045 ORTHO05D004836 5.9e-50 201.4 105 81.0
FvH4_5g07980 Fragaria vesca HOM05D001045 ORTHO05D004836 5.9e-50 201.4 150 62.0
FAN18G4157 Fragaria x ananassa HOM05D001045 ORTHO05D004836 5.9e-50 201.4 150 62.0
Phvul.003G209600 Phaseolus vulgaris HOM05D001045 ORTHO05D004836 5.9e-50 201.4 133 66.9
Carub.0008s2413 Capsella rubella HOM05D001045 ORTHO05D004836 1.0e-49 200.7 134 68.7
TAR629G1776 Trochodendron aralioides HOM05D001045 ORTHO05D004836 1.0e-49 200.7 136 69.1
unitig_27.g25101 Utricularia gibba HOM05D001045 ORTHO05D004836 1.0e-49 200.7 129 71.3
VMungo1215G2889 Vigna mungo HOM05D001045 ORTHO05D004836 1.0e-49 200.7 133 66.9
AL8G40490 Arabidopsis lyrata HOM05D001045 ORTHO05D004836 1.3e-49 200.3 137 67.9
ECA240G2390 Erigeron canadensis HOM05D001045 ORTHO05D004836 1.3e-49 200.3 105 81.9
Thhalv10003624m.g Eutrema salsugineum HOM05D001045 ORTHO05D004836 1.3e-49 200.3 137 67.2
Sabra12G0070200 Salix brachista HOM05D001045 ORTHO05D004836 1.3e-49 200.3 105 80.0
Actinidia15837 Actinidia chinensis HOM05D001045 ORTHO05D004836 1.7e-49 199.9 105 81.0
Actinidia25588 Actinidia chinensis HOM05D001045 ORTHO05D004836 1.7e-49 199.9 105 81.0
Glyma.04G194600 Glycine max HOM05D001045 ORTHO05D004836 1.7e-49 199.9 111 76.6
Lalb_Chr23g0273561 Lupinus albus HOM05D001045 ORTHO05D004836 1.7e-49 199.9 111 75.7
Manes.14G052700 Manihot esculenta HOM05D001045 ORTHO05D004836 1.7e-49 199.9 112 77.7
TPR.G27530 Trifolium pratense HOM05D001045 ORTHO05D004836 1.7e-49 199.9 148 62.8
HPP92_008938 Vanilla planifolia HOM05D001045 ORTHO05D004836 1.7e-49 199.9 148 63.5
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 2.3e-49 199.5 110 77.3
arahy.Tifrunner.gnm1.ann1.3PZ9PI Arachis hypogaea HOM05D001045 ORTHO05D004836 2.3e-49 199.5 110 77.3
Eucgr.B00129 Eucalyptus grandis HOM05D001045 ORTHO05D004836 2.3e-49 199.5 105 80.0
Nn3g16511 Nelumbo nucifera HOM05D001045 ORTHO05D004836 2.3e-49 199.5 105 80.0
QL10p004119 Quercus lobata HOM05D001045 ORTHO05D004836 2.3e-49 199.5 105 80.0
QL10p004182 Quercus lobata HOM05D001045 ORTHO05D004836 2.3e-49 199.5 105 80.0
Sc04g0000750 Simmondsia chinensis HOM05D001045 ORTHO05D004836 2.3e-49 199.5 154 60.4
GSVIVG01008515001 Vitis vinifera HOM05D001045 ORTHO05D004836 2.3e-49 199.5 111 77.5
Aqoxy3G01499 Aquilegia oxysepala HOM05D001045 ORTHO05D004836 3.0e-49 199.1 147 63.9
CSS0020803 Camellia sinensis var. sinensis HOM05D001045 ORTHO05D004836 3.0e-49 199.1 110 77.3
HanXRQChr03g0064991 Helianthus annuus HOM05D001045 ORTHO05D004836 3.0e-49 199.1 105 81.0
Lalb_Chr11g0069641 Lupinus albus HOM05D001045 ORTHO05D004836 3.0e-49 199.1 110 75.5
BcaC01g02587 Brassica carinata HOM05D001045 ORTHO05D004836 3.9e-49 198.7 138 68.1
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 3.9e-49 198.7 138 68.1
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 3.9e-49 198.7 138 68.1
Cfa018840 Carpinus fangiana HOM05D001045 ORTHO05D004836 3.9e-49 198.7 104 80.8
Ca_24509_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 3.9e-49 198.7 107 77.6
Haze_07234 Corylus avellana HOM05D001045 ORTHO05D004836 3.9e-49 198.7 104 80.8
Gorai.003G119600 Gossypium raimondii HOM05D001045 ORTHO05D004836 3.9e-49 198.7 129 69.8
MD06G1143600 Malus domestica HOM05D001045 ORTHO05D004836 3.9e-49 198.7 105 78.1
Medtr3g089020 Medicago truncatula HOM05D001045 ORTHO05D004836 3.9e-49 198.7 111 75.7
Zm00001eb234620 Zea mays HOM05D001045 ORTHO05D004836 3.9e-49 198.7 152 58.6
FAN04G1508 Fragaria x ananassa HOM05D001045 ORTHO05D004836 5.0e-49 198.4 150 62.0
Gohir.A03G053500 Gossypium hirsutum HOM05D001045 ORTHO05D004836 5.0e-49 198.4 111 76.6
MD14G1158900 Malus domestica HOM05D001045 ORTHO05D004836 5.0e-49 198.4 105 78.1
Potri.012G095800 Populus trichocarpa HOM05D001045 ORTHO05D004836 5.0e-49 198.4 104 80.8
Prupe.5G152800 Prunus persica HOM05D001045 ORTHO05D004836 5.0e-49 198.4 105 78.1
PGR083G0639 Punica granatum HOM05D001045 ORTHO05D004836 5.0e-49 198.4 150 62.0
Sabra15G0115200 Salix brachista HOM05D001045 ORTHO05D004836 5.0e-49 198.4 105 80.0
ClCG06G017790 Citrullus lanatus HOM05D001045 ORTHO05D004836 6.6e-49 198.0 105 81.0
Ciclev10018763m.g Citrus clementina HOM05D001045 ORTHO05D004836 6.6e-49 198.0 134 67.9
CsaV3_1G000660 Cucumis sativus L. HOM05D001045 ORTHO05D004836 6.6e-49 198.0 105 81.0
Dinv11158 Davidia involucrata HOM05D001045 ORTHO05D004836 6.6e-49 198.0 105 79.0
Glyma.17G128500 Glycine max HOM05D001045 ORTHO05D004836 6.6e-49 198.0 133 66.9
Potri.015G093600 Populus trichocarpa HOM05D001045 ORTHO05D004836 6.6e-49 198.0 105 79.0
Aa31LG1G18610 Aethionema arabicum HOM05D001045 ORTHO05D004836 8.6e-49 197.6 105 81.0
Duzib205G1644 Durio zibethinus HOM05D001045 ORTHO05D004836 8.6e-49 197.6 111 75.7
RcHm_v2.0_Chr7g0190431 Rosa chinensis HOM05D001045 ORTHO05D004836 8.6e-49 197.6 105 78.1
Lj1g0009758 Lotus japonicus HOM05D001045 ORTHO05D004836 1.1e-48 197.2 111 76.6
Sed0018235 Sechium edule HOM05D001045 ORTHO05D004836 1.1e-48 197.2 105 81.0
AagrBONN_evm.TU.Sc2ySwM_369.157 Anthoceros agrestis HOM05D001045 ORTHO05D004836 1.5e-48 196.8 104 82.7
MSTRG.22907 Avicennia marina HOM05D001045 ORTHO05D004836 1.5e-48 196.8 104 81.7
EL10As4g23417 Beta vulgaris HOM05D001045 ORTHO05D004836 1.5e-48 196.8 150 60.7
FAN08G1251 Fragaria x ananassa HOM05D001045 ORTHO05D004836 1.5e-48 196.8 150 60.7
Os02g0539600 Oryza sativa ssp. japonica HOM05D001045 ORTHO05D004836 1.5e-48 196.8 122 69.7
Psat5g139840 Pisum sativum HOM05D001045 ORTHO05D004836 1.5e-48 196.8 105 77.1
SGA_v2.0_scaffold215G42334 Striga asiatica HOM05D001045 ORTHO05D004836 1.5e-48 196.8 107 78.5
VMungo1309G1120 Vigna mungo HOM05D001045 ORTHO05D004836 1.5e-48 196.8 107 77.6
CDE04G0888 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 1.9e-48 196.4 104 78.8
Migut.I00512 Erythranthe guttata HOM05D001045 ORTHO05D004836 1.9e-48 196.4 104 78.8
Glyma.06G171400 Glycine max HOM05D001045 ORTHO05D004836 1.9e-48 196.4 105 79.0
Peaxi162Scf00089g00522 Petunia axillaris HOM05D001045 ORTHO05D004836 1.9e-48 196.4 104 79.8
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 2.5e-48 196.1 105 79.0
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 2.5e-48 196.1 105 79.0
COL.COLO4_28086 Corchorus olitorius HOM05D001045 ORTHO05D004836 2.5e-48 196.1 113 77.0
Rhsim08G0188700 Rhododendron simsii HOM05D001045 ORTHO05D004836 2.5e-48 196.1 104 79.8
Ca_00917_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 3.3e-48 195.7 107 76.6
Gohir.A07G051700 Gossypium hirsutum HOM05D001045 ORTHO05D004836 3.3e-48 195.7 105 79.0
Solyc03g111260.3 Solanum lycopersicum HOM05D001045 ORTHO05D004836 3.3e-48 195.7 147 60.5
Sopen03g030390 Solanum pennellii HOM05D001045 ORTHO05D004836 3.3e-48 195.7 147 60.5
Thecc.03G126800 Theobroma cacao HOM05D001045 ORTHO05D004836 3.3e-48 195.7 105 79.0
Peaxi162Scf00536g00312 Petunia axillaris HOM05D001045 ORTHO05D004836 4.3e-48 195.3 110 75.5
Hund02428 Selenicereus undatus HOM05D001045 ORTHO05D004836 4.3e-48 195.3 136 66.2
Ah.11g045420 Amaranthus hybridus HOM05D001045 ORTHO05D004836 5.6e-48 194.9 111 73.9
DCAR_016404 Daucus carota HOM05D001045 ORTHO05D004836 5.6e-48 194.9 113 73.5
PGSC0003DMG402015244 Solanum tuberosum HOM05D001045 ORTHO05D004836 5.6e-48 194.9 147 60.5
TWI14G1089 Tripterygium wilfordii HOM05D001045 ORTHO05D004836 5.6e-48 194.9 111 73.9
CiPaw.12G041700 Carya illinoinensis HOM05D001045 ORTHO05D004836 7.3e-48 194.5 150 63.3
Cc03_g13140 Coffea canephora HOM05D001045 ORTHO05D004836 7.3e-48 194.5 104 78.8
Gorai.001G059600 Gossypium raimondii HOM05D001045 ORTHO05D004836 7.3e-48 194.5 105 79.0
arahy.Tifrunner.gnm1.ann1.VYC4MA Arachis hypogaea HOM05D001045 ORTHO05D004836 1.2e-47 193.7 105 77.1
CAN.G352.26 Capsicum annuum HOM05D001045 ORTHO05D004836 1.2e-47 193.7 135 65.9
Mapoly0037s0113 Marchantia polymorpha HOM05D001045 ORTHO05D004836 1.2e-47 193.7 114 74.6
Medtr4g103770 Medicago truncatula HOM05D001045 ORTHO05D004836 1.2e-47 193.7 149 62.4
vmacro16670 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 1.2e-47 193.7 111 73.0
vmacro19213 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 1.2e-47 193.7 134 64.9
AUR62025919 Chenopodium quinoa HOM05D001045 ORTHO05D004836 1.6e-47 193.4 105 78.1
DCAR_026220 Daucus carota HOM05D001045 ORTHO05D004836 1.6e-47 193.4 111 73.0
CARHR277280 Cardamine hirsuta HOM05D001045 ORTHO05D004836 2.1e-47 193.0 104 78.8
Lsat_1_v5_gn_1_81241 Lactuca sativa HOM05D001045 ORTHO05D004836 2.8e-47 192.6 104 76.9
Nitab4.5_0003680g0020 Nicotiana tabacum HOM05D001045 ORTHO05D004836 2.8e-47 192.6 117 72.6
AUR62029637 Chenopodium quinoa HOM05D001045 ORTHO05D004836 3.6e-47 192.2 105 77.1
Nitab4.5_0003005g0050 Nicotiana tabacum HOM05D001045 ORTHO05D004836 3.6e-47 192.2 117 71.8
PSO017G5689 Papaver somniferum HOM05D001045 ORTHO05D004836 3.6e-47 192.2 104 78.8
PSO478G0896 Papaver somniferum HOM05D001045 ORTHO05D004836 3.6e-47 192.2 104 78.8
Cpa.g.sc13.140 Carica papaya HOM05D001045 ORTHO05D004836 4.7e-47 191.8 98 82.7
CBR_g16830 Chara braunii HOM05D001045 ORTHO05D004836 6.2e-47 191.4 120 71.7
Gohir.D07G056200 Gossypium hirsutum HOM05D001045 ORTHO05D004836 1.8e-46 189.9 98 81.6
CDE07G0382 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 2.3e-46 189.5 97 81.4
MELO3C026230.2 Cucumis melo HOM05D001045 ORTHO05D004836 3.1e-46 189.1 117 71.8
Pp3c20_9790 Physcomitrium patens HOM05D001045 ORTHO05D004836 3.1e-46 189.1 104 77.9
Oeu006361.1 Olea europaea HOM05D001045 ORTHO05D004836 8.9e-46 187.6 98 81.6
Lj9C477G11 Lonicera japonica HOM05D001045 ORTHO05D004836 1.2e-45 187.2 98 78.6
SMO141G0105 Selaginella moellendorffii HOM05D001045 ORTHO05D004836 1.5e-45 186.8 111 73.0
Actinidia36799 Actinidia chinensis HOM05D001045 ORTHO05D004836 3.5e-42 175.6 88 83.0
PRCOL_00002539 Prasinoderma coloniale HOM05D001045 ORTHO05D004836 1.6e-34 150.2 130 54.6
Cre16.g683050 Chlamydomonas reinhardtii HOM05D001045 ORTHO05D004836 8.6e-33 144.4 81 72.8
MCO10G193 Micromonas commoda HOM05D001045 ORTHO05D004836 2.1e-31 139.8 83 69.9
Hma1.2p1_0014F.1_g009640 Hydrangea macrophylla HOM05D001045 ORTHO05D004836 3.6e-23 112.5 63 73.0
Dinv04873 Davidia involucrata HOM05D001045 ORTHO05D004836 1.6e-18 97.1 46 87.0
TAR371G0766 Trochodendron aralioides HOM05D001045 ORTHO05D004836 6.6e-17 91.7 46 80.4
Pp3s42_180 Physcomitrium patens HOM05D001045 ORTHO05D044363 4.5e-13 79.0 78 42.3
SEGI_01988 Sequoiadendron giganteum HOM05D001045 ORTHO05D004836 1.1e-11 74.3 36 80.6
Dinv04872 Davidia involucrata HOM05D001045 ORTHO05D004836 7.4e-08 61.6 37 64.9
Pp3c5_16690 Physcomitrium patens HOM05D002001 ORTHO05D006833 1.8e-06 57.0 82 34.1
Haze_26947 Corylus avellana HOM05D002001 ORTHO05D006833 6.9e-06 55.1 85 30.6


User provided reference genes

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