Gene: BraA06t25957Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA06t25957Z
- Transcript Identifier BraA06t25957Z
- Gene Type Coding gene
- Location A06 : 44798107-44805439 : positive
Gene Family Information
- ID HOM05D001045
- #Genes/#Species 581/100
- Phylogenetic origin
- ID ORTHO05D004836
- #Genes/#Species 170/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- uniprot A0A3P5YIA8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0060918 | ISO | PLAZA Integrative Orthology | auxin transport | AT5G63420 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G63420 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT5G63420 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G63420 |
| GO:0006414 | ISO | PLAZA Homology (enrichment) | translational elongation | HOM05D001045 |
| GO:0009942 | ISO | PLAZA Integrative Orthology | longitudinal axis specification | AT5G63420 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0008409 | ISO | PLAZA Integrative Orthology | 5'-3' exonuclease activity | AT5G63420 |
| GO:0003746 | ISO | PLAZA Homology (enrichment) | translation elongation factor activity | HOM05D001045 |
| GO:0004519 | ISO | PLAZA Integrative Orthology | endonuclease activity | AT5G63420 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G63420 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G63420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain |
| IPR036591 | YggU-like superfamily |
| IPR003746 | Protein of unknown function DUF167 |
| IPR042173 | Ribonuclease J, domain 2 |
| IPR044822 | Myb/SANT-like DNA-binding domain 4 |
| IPR001279 | Metallo-beta-lactamase |
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |