Gene: Ah.11g045420
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g045420
- Transcript Identifier Ah.11g045420-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 14613599-14626097 : negative
Gene Family Information
- ID HOM05D001045
- #Genes/#Species 581/100
- Phylogenetic origin
- ID ORTHO05D004836
- #Genes/#Species 170/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.11g045420-v1.1.a1
Descriptions
- Description Ribonuclease J (RNase J) (EC 3.1.-.-) (Protein EMBRYO DEFECTIVE 2746)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0060918 | ISO | PLAZA Integrative Orthology | auxin transport | AT5G63420 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G63420 |
GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT5G63420 |
GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G63420 |
GO:0006414 | ISO | PLAZA Homology (enrichment) | translational elongation | HOM05D001045 |
GO:0009942 | ISO | PLAZA Integrative Orthology | longitudinal axis specification | AT5G63420 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008409 | ISO | PLAZA Integrative Orthology | 5'-3' exonuclease activity | AT5G63420 |
GO:0003746 | ISO | PLAZA Homology (enrichment) | translation elongation factor activity | HOM05D001045 |
GO:0004519 | ISO | PLAZA Integrative Orthology | endonuclease activity | AT5G63420 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G63420 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G63420 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.11.1.4 | RNA processing.organelle machinery.ribonuclease activities.exo-/endoribonuclease (RNase J) |