Gene: GSVIVG01008515001
General Information
Structural Information
- Species Vitis vinifera
- Gene Identifier GSVIVG01008515001
- Transcript Identifier GSVIVT01008515001
- Gene Type Coding gene
- Location chr17 : 1201986-1215948 : negative
Gene Family Information
- ID HOM05D001045
- #Genes/#Species 581/100
- Phylogenetic origin
- ID ORTHO05D004836
- #Genes/#Species 170/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id GSVIVG01008515001.Genoscope12X
- pacid 17821103
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0060628 | IEA | InterPro | regulation of ER to Golgi vesicle-mediated transport | |
| GO:0060918 | ISO | PLAZA Integrative Orthology | auxin transport | AT5G63420 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G63420 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT5G63420 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G63420 |
| GO:0006414 | ISO | PLAZA Homology (enrichment) | translational elongation | HOM05D001045 |
| GO:0009942 | ISO | PLAZA Integrative Orthology | longitudinal axis specification | AT5G63420 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008409 | ISO | PLAZA Integrative Orthology | 5'-3' exonuclease activity | AT5G63420 |
| GO:0003746 | ISO | PLAZA Homology (enrichment) | translation elongation factor activity | HOM05D001045 |
| GO:0004519 | ISO | PLAZA Integrative Orthology | endonuclease activity | AT5G63420 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G63420 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070939 | IEA | InterPro | Dsl1/NZR complex | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G63420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042044 | EXOC6/PINT-1/Sec15/Tip20, C-terminal, domain 2 |
| IPR044822 | Myb/SANT-like DNA-binding domain 4 |
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |
| IPR001279 | Metallo-beta-lactamase |
| IPR007528 | RINT-1/Tip20 |
| IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain |
| IPR042173 | Ribonuclease J, domain 2 |
| Mapman id | Description |
|---|---|
| 16.11.1.4 | RNA processing.organelle machinery.ribonuclease activities.exo-/endoribonuclease (RNase J) |
| 22.2.3.2.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.DSL1 tethering complex.component MAG2 |